Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1304 ATGACAGGAGTAGGCACATACCTTGACTTTCACCTTTTCGATAAGGAAAAGCATAAGCATCTAGATTGGAGATTACGACTAAGCATTGTCACTGGAATTGCAAAAGGACTGCTATACCTTCATGAGGATTCTCGACTTAGAGTAATCCACAGGGATCTGAAAGCTAGCAATGTTCTTCTGGATGATGAAATGAATCCAAAAATATCAGATTTTGGGTTAGCAAGGACATTTGAAAAAGATCAATGTCCAAGAAAAACAAATAGAGTTATCGGAACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGGTTATTTTCGGTGAAATCCGATGTTTTCAGTTTTGGAGTTCTTATATTAGAAATAGTGTATGGAAAAAGAAATGGAGAATTCTTTCTTTCAGAACATATGCAAAGTCTTCTATTATATACTTGGAAACTTTGGTGTGAAGGAAAAAGTATAGAATTAATCGATCCATTTCACCAAAAGACGTACATTGAAAGTGAAGTCTTGAAGTGTATACACATTGGTTTATTGTGTGTACAAGAAGATGCAGCAGATCGACCAACCATTTCCACTGTCGTTCGTATGCTAGGGAGTGATACAGTAGCTCTTCCACAACCCAATCAACCAGCATTTTCAGTTGGGAGAATGTCCAAGAATGATGATCAAACTTCAAAAACTTCCAAGGATAATTATTCGGTTGATGAAGTAACTCTAACTATTGTTTCACCTAGATAG 741 0.3684 MTGVGTYLDFHLFDKEKHKHLDWRLRLSIVTGIAKGLLYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARTFEKDQCPRKTNRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLILEIVYGKRNGEFFLSEHMQSLLLYTWKLWCEGKSIELIDPFHQKTYIESEVLKCIHIGLLCVQEDAADRPTISTVVRMLGSDTVALPQPNQPAFSVGRMSKNDDQTSKTSKDNYSVDEVTLTIVSPR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1304 246 SUPERFAMILY Protein kinase-like (PK-like) 8 222 IPR011009 -
Mtr8g1304 246 MobiDBLite consensus disorder prediction 208 232 - -
Mtr8g1304 246 MobiDBLite consensus disorder prediction 208 222 - -
Mtr8g1304 246 Pfam Protein tyrosine and serine/threonine kinase 16 198 IPR001245 GO:0004672|GO:0006468
Mtr8g1304 246 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1304 246 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1304 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Mtr8g1304 246 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 244 - -
Mtr8g1304 246 Gene3D Transferase(Phosphotransferase) domain 1 6 207 - -
Mtr8g1304 246 Pfam Domain of unknown function (DUF3403) 200 246 IPR021820 GO:0004674
Mtr8g1304 246 PANTHER PROTEIN KINASE DOMAIN 7 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1304 Mtr-Chr8 15990970 15992851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1304 8 246 Receptor kinase-like Gene Family AT4G23150 51.440 2.18e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1304 PK_Tyr_Ser-Thr 5.9e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1304 8 15990970 15992851 Mtr8g1304 8 15990970 15992851 ECH