Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1300 ATGAGCATTATGAGATTTCTTCTTAGCTTCATGCTTCTTCTTCTCTTTCTCTTCACACCAACAAATTCACAAACTCCAATTTCATTGAACACTTTCTGCAACAACTCAACTAAAAAACCTCTCACAACTTCATACAAAACCAACGTTAACAAAGTCCTACAATGGATGAACACTATTTCTTCAACAGGCCAAGAATCTAACCTAACCTCTATAGGAAGCAACAAGAATGATCACAATGACACAGTTTACGGAAACTACGACTGTCGCGGCGACATACCTGCACACTTCTGTAATTTCTGTGTCAACAGTGCTGTCAAAGAAATTTCACAAACTTGTACCAATGGTACTTCAGCTATTATATTCTATGACATGTGCATACTACGTTATTCTAACAAGAATTTCTTTGGAAAAATCAACTTATCACCTTCATTTAATTTAACTGGACCAAAAAAAATAAAGGACTCAAGAGATTTTGCGAAAGCCGAGGGTTTGATGAAGGATTTGATAAGGAAGACGACGGATGCTAATAGAATGTGGGCGACGAGCGTGTTTGATTGGAGTGATACCGAGAAAAGATATGGTTTGGTTCAGTGTGCTGGAGATCTTGATAATAATGGATGTAAAGAGTGTTTGAAGGAGTTGATAGATAGGGTTGCTGAGTGTTGTGGAACATCAGTAATGTGGGGTATTGTTGCTCCAAGTTGTGGAGTTAGGTTTGATGATAAAATGTTTTTTCAGGTATCTTCTGAGCAACCAGGGTCTTCTTCTTCACCAAATCCAGCCAAGCAGGAAGGTTCAAGTAACAAAAAAACCTTGACCATCATCTTAGTAAGTGTACTAATGGCAGTAGCTCTATTAATTTGTTGTGTCTTCTACTCATGGAGAAGGAATAATAGGTTAAGTCAAGGTGAATCGACGTTGAGCACCACTCCTCTAGCTTTTCATGGTCATGTTCTAAGAGATGATTCATTGAATGGAGACCTTCCAATAATCCCTTTAATTGTACTTCAACAAAGCACTGATTACTTTTCAGAGTCAACTAAATTAGGACAAGGTGGATTTGGATCTGTTTACAAGGGTACTTTACCGGATGGGACAGAAATTGCGGCCAAAAGGCTTTCAGAAACATCAGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTGATTTTCATAGCAAAACTACAACATAGAAACCTCGTGAAACTCTTGGGTTGTTGCTTTGAACAAAATGAAAAGATACTAGTATACGAGTACATGCAAAATTCAAGCCTCGACTTTCACCTTTTCAATTCGGGAAATCATGATAAACTAGATTGGAGTGTACGATTAAACATTATCAACGGGATAGCAAGAGGACTGTTATATCTTCACGAGGATTCTCGACTTAGAGTTATCCATAGAGATATGAAAGCAAGCAATGTACTTTTGGACGATGAAATGAATCCAAAAATATCAGACTTTGGATTGGCAAGAAGGTTTGAAAAAGGCCAAAGTCAGACAGAAACAAAAAGAGTCATGGGAACCTACGGATACATGGCTCCAGAATATGCTATGGCTGGGTTATTTTCAGTGAAGTCTGATGTATTTAGCTTTGGAGTTCTTATATTAGAAATAGTTTATGGAAAAAGAAATGGAGAATTCTTTCTTTCAGAACATAGGCAAACACTTCTCTTATATACTTGGAAACTATGGGGTGAAGGTAAAAGTTGGGAATTCGTTGATCCAATCCAAAGAAAATCATACATCGAAAGTGAAGTTATGAAGTGCGTACACATCGGTTTATTGTGTGTGCAGGAAGACGCTGCAGATCGACCAACCATGTCCACCATTGTTCTCATGCTAGGCAGCGACACAATGGTCCTTCCAAAACCGAAAAAACCAGCCTTTTCTGTCGGAAGAATGTTCAATGATGAAGATTCAACTTCAAAAAGTTATACTGATAACTCGGTTAACGAACTTACAATTACTAGTTTTATACCTAGATAG 1986 0.3787 MSIMRFLLSFMLLLLFLFTPTNSQTPISLNTFCNNSTKKPLTTSYKTNVNKVLQWMNTISSTGQESNLTSIGSNKNDHNDTVYGNYDCRGDIPAHFCNFCVNSAVKEISQTCTNGTSAIIFYDMCILRYSNKNFFGKINLSPSFNLTGPKKIKDSRDFAKAEGLMKDLIRKTTDANRMWATSVFDWSDTEKRYGLVQCAGDLDNNGCKECLKELIDRVAECCGTSVMWGIVAPSCGVRFDDKMFFQVSSEQPGSSSSPNPAKQEGSSNKKTLTIILVSVLMAVALLICCVFYSWRRNNRLSQGESTLSTTPLAFHGHVLRDDSLNGDLPIIPLIVLQQSTDYFSESTKLGQGGFGSVYKGTLPDGTEIAAKRLSETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEQNEKILVYEYMQNSSLDFHLFNSGNHDKLDWSVRLNIINGIARGLLYLHEDSRLRVIHRDMKASNVLLDDEMNPKISDFGLARRFEKGQSQTETKRVMGTYGYMAPEYAMAGLFSVKSDVFSFGVLILEIVYGKRNGEFFLSEHRQTLLLYTWKLWGEGKSWEFVDPIQRKSYIESEVMKCVHIGLLCVQEDAADRPTMSTIVLMLGSDTMVLPKPKKPAFSVGRMFNDEDSTSKSYTDNSVNELTITSFIPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1300 661 Gene3D Phosphorylase Kinase; domain 1 317 418 - -
Mtr8g1300 661 Pfam Domain of unknown function (DUF3403) 616 661 IPR021820 GO:0004674
Mtr8g1300 661 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1300 661 Gene3D Transferase(Phosphotransferase) domain 1 419 621 - -
Mtr8g1300 661 Pfam Salt stress response/antifungal 33 131 IPR002902 -
Mtr8g1300 661 Pfam Salt stress response/antifungal 162 241 IPR002902 -
Mtr8g1300 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Mtr8g1300 661 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Mtr8g1300 661 SUPERFAMILY Protein kinase-like (PK-like) 327 614 IPR011009 -
Mtr8g1300 661 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1300 661 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Mtr8g1300 661 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 658 - -
Mtr8g1300 661 Gene3D - 145 244 IPR038408 -
Mtr8g1300 661 Gene3D - 27 134 IPR038408 -
Mtr8g1300 661 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Mtr8g1300 661 PANTHER PROTEIN KINASE DOMAIN 18 658 - -
Mtr8g1300 661 ProSiteProfiles Gnk2-homologous domain profile. 27 134 IPR002902 -
Mtr8g1300 661 CDD STKc_IRAK 349 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1300 Mtr-Chr8 15937998 15942279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1300 8 661 Receptor kinase-like Gene Family AT4G05200 40.233 2.31e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1300 PK_Tyr_Ser-Thr 6.2e-48 CL0016