Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1299 ATGGCATGTATCAGCATTCATAACTTCATGCTCTTACTTCTTTTTCTCTTTCACTTCACACCAACAAGTGCACAAGTTCCTATTTTCTTGTACAGTTTTTGTCAAAACTCAACAGAAAAATCTCTCACAGCTTCATACAAATCCAACGTAAACAAATTACTCTTGTGGATAAACTCTGATTCTGCCGCGGGAACAGAATTTAACAACAACAAAATAGGCAGCAACAACACCACCAGTGATGATGTTTATGGAAACTATGATTGTCGGGCTGACGTCACAGGAAGTTTCTGTCAATTTTGTATCAACACTGCTGTCAAAGAAATTGCTCAACGTTGTCTTAACAGCGACACAGCTGTTATATTTTATGATGTATGCATAATCCGTTACTCTAACAAGAATTTCTTTGGAAATGTTTCCATCACACCGTCATGGAATGTTACTGGATCGAAAAAGATAAAAGACTCAACTGAACTTACAAAAGTAGAGGATTACATAGGGATTTTGATAAGAAAAGTGACGGTAGAGACTAATCAATCATGGGGAGCGAGTGAGTTTAATTCGAATGAAACTGGTAAAAGATATGGATTTCTGCAGTGTGCTAGAGAGCTTGATAAGGAAGGGTGCAGACAGTGTTTGGAGGCTGTGTTGGACTTAGTTCCCAAGTGTTGTGGAACAAAGGTAGCATGGGAAGTTGTTGTTCCGAGTTGTGGAATCAAGTTTGATGATCAAAAGTTCTTCCAGTTAAATGACCAAAGTGGATCCTCTTCACTTAAGCCAAATCAAGCCAAGCAGGAAGGTGCAAGTAACAAAAAAACCTTGATCATCATCTTAGTAAGTGTACTAATGGCAGTAGCTCTCCTATGTTGTTGTGTCTACTACTACTGGAGAAAGAATGGGTTATGTAAAGGTGGATTTCTGTTGAGGAAAACATTGAATATAGATGATACATTGAATGGAGACCTTCCTACGATCCCTTTTTCTGTAATTCAACATGCCACTAATTACTTTTCATCATCATCAAAATTAGGAGAAGGTGGCTTTGGACCTGTTTTCAAGGGTACTTTACCAGATGGGACAGAAATTGCAGTCAAAAGGCTTGCAGAAACGTCGGGTCAAGGTTCAGAGGAGTTCAAGAATGAAGTAATTTTCATAGCTAAACTGCAACACAGAAACCTCGTGAGACTCTTGGGTTGCTGCATTGAAGGAAATGAAAAGATACTAGTATATGAATACATGCCGAATTCAAGCCTTGACTTTCACCTTTTCGATGAAGAACAGCATAAGAAACTAGATTGGACATTACGACTAAGTATTATCAATGGAATCGCAAGAGGACTTTTATACCTTCACCAAGATTCTCGACTTAGAGTTATCCATAGAGATCTGAAAGCCAGCAATGTTCTTCTGGATGATGAAATGAATCCGAAAATATCAGATTTTGGATTAGCAAGGAAATTTGAAAAAGGTCAAAGTCAGACAAAAACAAAAAGAGTTATTGGCACCTACGGATACATGGCTCCAGAATATGCTATGGCTGGATTATTTTCAGTGAAATCCGATGTTTTCAGCTTTGGAGTTCTTGTATTAGAAATTGTGTATGGAAAAAGGAATGGTGAATTCATACTTTCAGAACATAGGCAAAGTCTTCTATTATATACTTGGAAGCTTTGGTGTGAAGGAAAAAGCTTGGAATTAATAGATCCAATCCACAAAAAATCATACATTGAAAGTGAGGTTATGAAGTGCATACACATTGGTTTATTGTGTGTACAACAAGATGCTGCAGATCGACCAACCATGTCCACGGTCGTTGCTATGCTAGGCAGTGACACAATGCCCATTCCAAAACCCAAGCAACCGGCATTTTCAGTAGGAAGAATGACGGAGGACGATCCAACTTTAAAAAGTTATAAGGATAATTATGTTGATGAAGTACCCATAACTATTGTTTCGCCTAGATACTGGAATAAGAGACTAATGAGAAGCCATAAACACAATTCTCTAGTCAGAGACAGTAAGAGCGATACAACCTTAAAATACTACTCCATGGAAGGAAGAAAACTAAACTTGAGATCAATATTTTTTGCTTTCATACTATATATAAGCTTCAAACAACTCATTACAAAAGCTCAATCACCTACTTATATGCGGGATGACTGTAATTACTCAAAACCAAAGGTTCTTAGCAATGCATACAAAACAAATCTCAAAAGCATCCTCTCATATCTATCTGCTGATGCAGCCAAAAGCAAAGGTTATAACTACAACAGCATAGGCGAAAACACAACAAAAGGAGATGCAGTGTATGGTCTCTATGATTGTCGTGGCGATGTAAGCTTTTGTGAATTATGTGTCGCTTCTGCTACTAGAAAAGTTCTTGAGCGCTGCCCCAATAGAGTCGCCGCTACTATATTTTACAGCGACTGCATTTTGAGGTACTCAAATGAGAATTTCTTTGGGAAAGTCACAACTTACCCTAATTGGACTCGTGTTGGATCTAAAACCGTCTCTAATGCAATAGAAATTCAGAAAAGTGAGGATTTGATGAAATTTTTGATCAAAAAAGCAACTACTGAGAGAAACCAATTGTATTATATGAGCAGTTTCAATTTGAGTTCTACTGAGGGTAGGTATGGACTGGTTCAATGCAGTAGAGATCTTACAAATGAAAGGTGCAGACAGTGTTTGGAGATTATGTTAGCAACGGTTCACAAATGTTGTGAACATAAGTTGGGGTGGCTTGTTGGATCTGCTAGTTGTCTGATTAGGTATGATGATTATAAGTTCTATCAGAACCTTGAGCAATTCCCTTCAGAACTTGTTCCTAATCCACAAACAGTTACAGCAAAAAAGAAAGGTTCTAGTAAGTCAAAAAACTTGATCATTGGCTTTAGTGTGCTAGGATCAGTAATTCTACTAAGTTCCACTATATACTGTTTCTGGTGCAAGAATAGAGTTAGAAAAGATTGGCTGGCACCTGCATATGAGGAAACACTGAATGCAGATCTTCCTACAATCCCATTGATCACAATTCAACATTGTACTAATAACTTTTCAGAAACATCTAAATTAGGGGAAGGTGGATTTGGATCTGTCTATAAGGGAATTCTGCCAGATGGAAGACAAATAGCCGTAAAAAGGCTCTCAAGAACTTCTGGTCAAGGCTCAGAGGAGTTCAAGAATGAAGTAATGTTTATAGCGAAATTGCAACATCGCAACCTTGTAAGACTTTTAGCATGCTGCTTGGAAGGAAATGAGAAGCTACTTGTGTATGAGTTTATGCCGAATGCAAGTCTGGACTTTCACCTGTTTGATAATGAAAAGAGAAAGGAACTAAATTGGAAACTAAGTTTGAGCATTATCAATGGAATAGCTAAAGGTCTTTTATACCTCCATGAGGACTCTAGATTAAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGATCATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGACATAGGCCAGAACCAGGCAAATACAAGACGAATAATGGGCACCTATGGATACATGGCACCAGAATACGCAATGGAAGGAGTATTTTCTGTGAAAACCGATGTATTCAGCTTTGGAGTACTAGTGTTGGAAATCATTAGTGGGAAAAAGAATACTGGATTCTATCTATCAGAACATGGTCAGAGTCTTCTATTATATACATGGAAAAAATGGTGTGAAGGAACGTGTTTGGAAATAATGGATTCGGTACTAGGAAAATCATGCATCGACGACAATGAGGTTGTGAGGTGCATAAACATAGGTCTTTTGTGTGTTCAAGAAGATGCGGCAGATAGACCAACCATGTCAACTGTTGTTGTAATGTTGGCTAGTGACACAATGACCCTTCCAAAACCCAAACAACCTGCATTTTCAATTGGAAGAATGACCTCTACTGATTCATCTTCCTCAAAAAGTTTCAAGGATCCTTCCATCAATGATGTAACAGTCTCAAACATTTTACCAAGGTAA 4014 0.3789 MACISIHNFMLLLLFLFHFTPTSAQVPIFLYSFCQNSTEKSLTASYKSNVNKLLLWINSDSAAGTEFNNNKIGSNNTTSDDVYGNYDCRADVTGSFCQFCINTAVKEIAQRCLNSDTAVIFYDVCIIRYSNKNFFGNVSITPSWNVTGSKKIKDSTELTKVEDYIGILIRKVTVETNQSWGASEFNSNETGKRYGFLQCARELDKEGCRQCLEAVLDLVPKCCGTKVAWEVVVPSCGIKFDDQKFFQLNDQSGSSSLKPNQAKQEGASNKKTLIIILVSVLMAVALLCCCVYYYWRKNGLCKGGFLLRKTLNIDDTLNGDLPTIPFSVIQHATNYFSSSSKLGEGGFGPVFKGTLPDGTEIAVKRLAETSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIEGNEKILVYEYMPNSSLDFHLFDEEQHKKLDWTLRLSIINGIARGLLYLHQDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARKFEKGQSQTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLVLEIVYGKRNGEFILSEHRQSLLLYTWKLWCEGKSLELIDPIHKKSYIESEVMKCIHIGLLCVQQDAADRPTMSTVVAMLGSDTMPIPKPKQPAFSVGRMTEDDPTLKSYKDNYVDEVPITIVSPRYWNKRLMRSHKHNSLVRDSKSDTTLKYYSMEGRKLNLRSIFFAFILYISFKQLITKAQSPTYMRDDCNYSKPKVLSNAYKTNLKSILSYLSADAAKSKGYNYNSIGENTTKGDAVYGLYDCRGDVSFCELCVASATRKVLERCPNRVAATIFYSDCILRYSNENFFGKVTTYPNWTRVGSKTVSNAIEIQKSEDLMKFLIKKATTERNQLYYMSSFNLSSTEGRYGLVQCSRDLTNERCRQCLEIMLATVHKCCEHKLGWLVGSASCLIRYDDYKFYQNLEQFPSELVPNPQTVTAKKKGSSKSKNLIIGFSVLGSVILLSSTIYCFWCKNRVRKDWLAPAYEETLNADLPTIPLITIQHCTNNFSETSKLGEGGFGSVYKGILPDGRQIAVKRLSRTSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEGNEKLLVYEFMPNASLDFHLFDNEKRKELNWKLSLSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARAFDIGQNQANTRRIMGTYGYMAPEYAMEGVFSVKTDVFSFGVLVLEIISGKKNTGFYLSEHGQSLLLYTWKKWCEGTCLEIMDSVLGKSCIDDNEVVRCINIGLLCVQEDAADRPTMSTVVVMLASDTMTLPKPKQPAFSIGRMTSTDSSSSKSFKDPSINDVTVSNILPR* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1299 1337 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1299 1337 Gene3D Transferase(Phosphotransferase) domain 1 412 613 - -
Mtr8g1299 1337 Gene3D Transferase(Phosphotransferase) domain 1 1094 1301 - -
Mtr8g1299 1337 SMART serkin_6 1018 1295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1299 1337 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1299 1337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1139 1151 IPR008271 GO:0004672|GO:0006468
Mtr8g1299 1337 Pfam Protein tyrosine and serine/threonine kinase 339 607 IPR001245 GO:0004672|GO:0006468
Mtr8g1299 1337 Pfam Protein tyrosine and serine/threonine kinase 1021 1288 IPR001245 GO:0004672|GO:0006468
Mtr8g1299 1337 MobiDBLite consensus disorder prediction 1306 1324 - -
Mtr8g1299 1337 CDD STKc_IRAK 1024 1290 - -
Mtr8g1299 1337 Gene3D - 27 134 IPR038408 -
Mtr8g1299 1337 Gene3D - 830 929 IPR038408 -
Mtr8g1299 1337 Gene3D - 146 245 IPR038408 -
Mtr8g1299 1337 Gene3D - 713 818 IPR038408 -
Mtr8g1299 1337 Pfam Domain of unknown function (DUF3403) 1292 1337 IPR021820 GO:0004674
Mtr8g1299 1337 SUPERFAMILY Protein kinase-like (PK-like) 999 1290 IPR011009 -
Mtr8g1299 1337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Mtr8g1299 1337 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Mtr8g1299 1337 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Mtr8g1299 1337 Pfam Salt stress response/antifungal 846 927 IPR002902 -
Mtr8g1299 1337 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Mtr8g1299 1337 Pfam Salt stress response/antifungal 179 242 IPR002902 -
Mtr8g1299 1337 Pfam Salt stress response/antifungal 729 815 IPR002902 -
Mtr8g1299 1337 ProSitePatterns Protein kinases ATP-binding region signature. 1024 1046 IPR017441 GO:0005524
Mtr8g1299 1337 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 643 - -
Mtr8g1299 1337 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 701 1335 - -
Mtr8g1299 1337 CDD STKc_IRAK 342 607 - -
Mtr8g1299 1337 MobiDBLite consensus disorder prediction 1301 1324 - -
Mtr8g1299 1337 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 701 1335 - -
Mtr8g1299 1337 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 17 643 - -
Mtr8g1299 1337 ProSiteProfiles Protein kinase domain profile. 1018 1305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1299 1337 SUPERFAMILY Protein kinase-like (PK-like) 321 633 IPR011009 -
Mtr8g1299 1337 Gene3D Phosphorylase Kinase; domain 1 983 1093 - -
Mtr8g1299 1337 Gene3D Phosphorylase Kinase; domain 1 307 411 - -
Mtr8g1299 1337 ProSiteProfiles Gnk2-homologous domain profile. 824 929 IPR002902 -
Mtr8g1299 1337 ProSiteProfiles Gnk2-homologous domain profile. 714 818 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1299 Mtr-Chr8 15919348 15928429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1299 11 653 Receptor kinase-like Gene Family AT4G05200 40.299 1.32e-166 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1299 PK_Tyr_Ser-Thr 1.4e-46 CL0016