Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1289 ATGGCTTCCACACCTCCTTCCTTCTCTCCTTCTCGCACCACCTGCGCTTCTCTCCTCCGTCAATTGCAGGTGATATGGGATGAGATTGGGGAGAGTGACACTGATAGAGACAATATGCTTCTTCAACTGGAGCAAGAGTGCCTTGACATTTATTACAGAAAGGTTGAGCAAACCAGAAAGCACAAAGCTGACTTAAATAAGTGGTTGGATGATGCTGAATCTGAACTCGCAGATATTGTTTCTTCACTTGGGGATGATTGTGTGTCGATCTCACGGGGAAAGGGTACTCTGAAGCAGCAATTAGCTAACATTAGACCTGTATTAGAGGACTTGAAGTCAAGGAAGGCTGAGAGAGTTGAGGAAATTTTAGAAATAAAGTCCCAAATATCACAGATATGTGCTGAAATAGCAGGCTGTGGACAGTCCAAAGGTGTCACGGATCAAGATGTTGATCAATGTGATCTGACCATGGAGAAATTGGGGGAACTTAAATCGCATCTTCATGAACTTCAAAATGAAAAGATCTTACGCCAGCAGAAAGTGAAAAGTCACATCAGTACTATCAGTGAGATTTCAGCTGTAATGTCAATTGATATTTGGAAGACTTTAAACGACATCCACCCAAGCCTGAGCGGTTCATCAAATGGTGCACCACAATGCATTAGTAATGACACTCTTGCTAGATTAACTGGGGTTGTTCTTTCATTAAAGCAGGAAAAGCAACAAAGGCTACAAAAGGTACAAGAACTTGTTAAGTTTTTGGTAGAGTTATGGGATCTTATGGAGATACCCATTGATGAGCAAAAGGCCTTTAGCCATGTTACTAGATTAATTTCAGCATCAGTTGATGAAGTGTCAACCCAAGGTGGCCTTTCTGCTGATGTCATTGAGCAGGTTGAGGTTGAAGTTCAGCAGTTAAATGTTTTGAAAGCCAGTAAGATGAAGGAATTAGTGTTTAAAAGACAGAATGAACTTGAAGAAATATACAGAGGAGTTCACATGGATATGGATAGTGAAGCTGCTAGACAGACTCTGACCAGCCTCACAGAATCTGGTAATGTTGATATGTCTGAATTGCTTCAAAGCATGGATGAGCAAATCAGGAAGGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGACAGGGTGGAGAAATGGAAATTTGCTGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATCAAAATCGATATAGTGCAGTAAAAGGAGCACACAAAAATTTGAAGCGTGCGGAGAAAGCACGGATTCTTGTCAGCAAGATTCCATCTGTGGTTGAGAATTTGACTGCAAAAGTGAAAGCATGGGAGACGGAAAAAGGAATACCTTTCTTATATGAAAAGGTTCTGTTGTTGAATAGCTTGGATGAATACAACGTACAACGACAACTGAGAGAAGAAGAGAAGCGGAAATCTCGGGAGCAGAAGCGGCTTAATGAACAACTTGCTGTAGAGCAAGAAGCAATGTTTGGTTCAAAATCTGCAACAAAGAAGCCTCTGAACCAGAGCAGTCATGTTAACACTTTAGCTGGGACACCAAACGGGCGCCGGATGCATACTCCTTCAGGCCGTTATGGAACATCGGGTGCAAAGGATCGTAGGGAAAGTGGCAGAGTGAATAACATAATTCCAGTGAACTATGTTGCTCTTGCGAAAGATGATTCTGTTTCAAGGGGCAGTTAA 1707 0.4194 MASTPPSFSPSRTTCASLLRQLQVIWDEIGESDTDRDNMLLQLEQECLDIYYRKVEQTRKHKADLNKWLDDAESELADIVSSLGDDCVSISRGKGTLKQQLANIRPVLEDLKSRKAERVEEILEIKSQISQICAEIAGCGQSKGVTDQDVDQCDLTMEKLGELKSHLHELQNEKILRQQKVKSHISTISEISAVMSIDIWKTLNDIHPSLSGSSNGAPQCISNDTLARLTGVVLSLKQEKQQRLQKVQELVKFLVELWDLMEIPIDEQKAFSHVTRLISASVDEVSTQGGLSADVIEQVEVEVQQLNVLKASKMKELVFKRQNELEEIYRGVHMDMDSEAARQTLTSLTESGNVDMSELLQSMDEQIRKAKEQALSRRDILDRVEKWKFAAEEEKWLDEYERDQNRYSAVKGAHKNLKRAEKARILVSKIPSVVENLTAKVKAWETEKGIPFLYEKVLLLNSLDEYNVQRQLREEEKRKSREQKRLNEQLAVEQEAMFGSKSATKKPLNQSSHVNTLAGTPNGRRMHTPSGRYGTSGAKDRRESGRVNNIIPVNYVALAKDDSVSRGS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1289 568 MobiDBLite consensus disorder prediction 503 523 - -
Mtr8g1289 568 Coils Coil 463 493 - -
Mtr8g1289 568 Coils Coil 353 373 - -
Mtr8g1289 568 MobiDBLite consensus disorder prediction 498 546 - -
Mtr8g1289 568 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 563 IPR007145 GO:0000226|GO:0008017
Mtr8g1289 568 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 509 - -
Mtr8g1289 568 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 563 - -
Mtr8g1289 568 Coils Coil 237 257 - -
Mtr8g1289 568 Coils Coil 153 173 - -
Mtr8g1289 568 Coils Coil 296 316 - -
Mtr8g1289 568 Gene3D - 367 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1289 Mtr-Chr8 15802584 15810922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1289 13 534 EF-hand Containing Proteins AT5G62250 36.147 2.03e-93 295