Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1288 ATGGCTATGGAAAAATCAAATTCCTTTGAGAACATGAAACATTACACTGCTATGATATGTTTACAATTTGGCTATGCTGGTATGAACATTATCACTAAGGTTTCCCTCAACCAAGGAATGAGCCACTATGTCCTCGTCGTTTATCGCCACGCTTTTGCTACTGCTTCTATAGCTCCATTTGCATTCATGTTTGAGAGGAAAGGTCAACCTAAGATAACATTCCGAATTTTCTTGCAAATTTTCGTCCTAGCTCTTCTTGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCTTGTGCAATGAGCAACGTGCTTCCAGCCATGACTTTTGTGATGGCAGTTTTATGCAGGATGGAGAAGATAAACATAAAGCAAGTGAGATGCCAAGCAAAGATATTGGGAACAATTTTGACAGTGGCTGGTGCAATGCTAATGACATTATATAAAGGTCCTATTGTGGAAATGGTATGGGCCAAAAATAGACATCCTCAAAATGAAACACATGAAACATCAACCACAGGATCTTCTGAAAGAGATTGGATTTTAGGGTGCACTTTTCTTATCATTGCCACCTTTGCTTGGGCTTCACTCTTTGTCTTGCAAGCAAAAGTTATAGAGACGTACAAGCATCATCAACTAAGTCTTACTTCACTTGTGGTATTCATTGGTACTCTTCAAGCTATTGCTGTTACTTTTGTGGCTGAGCATGATCCTTCTGTATGGAGGATTGGTTGGGATATGAGTTTACTTGCTTCTGCCTATGCTGGAATTGTGACCTCAAGCTTGGCATACTATGTACAAGGGCTAGTGATTAGGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCAATCATGGGATCCTTTATCCTTGCAGAACAAATTTACTCTGGAGGTGTGATGGGTGCCATCTTGATTGTTATAGGCTTATATTCTGTTCTATGGGGAAAGCACAAGGAAGAAATAGAGAGAAAAGTAGATGATATTCCTTTGCCAATAAAGGGTCCTCAAATGAGTGGAAATTCAGGTCTAGTGATTGATGACACAGATCAAGTAAAACATGGTCAAGTTGAAGATACTAACAACATGCTTTCTTCAGTTGCAATAAGCATTCCTACTAATAATGTTAACCAGCAATAA 1188 0.3948 MAMEKSNSFENMKHYTAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFMFERKGQPKITFRIFLQIFVLALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINIKQVRCQAKILGTILTVAGAMLMTLYKGPIVEMVWAKNRHPQNETHETSTTGSSERDWILGCTFLIIATFAWASLFVLQAKVIETYKHHQLSLTSLVVFIGTLQAIAVTFVAEHDPSVWRIGWDMSLLASAYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAEQIYSGGVMGAILIVIGLYSVLWGKHKEEIERKVDDIPLPIKGPQMSGNSGLVIDDTDQVKHGQVEDTNNMLSSVAISIPTNNVNQQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1288 395 PANTHER WAT1-RELATED PROTEIN 9 368 - -
Mtr8g1288 395 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Mtr8g1288 395 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020|GO:0016021
Mtr8g1288 395 PANTHER WAT1-RELATED PROTEIN 9 368 IPR030184 GO:0016021|GO:0022857
Mtr8g1288 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Mtr8g1288 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1288 Mtr-Chr8 15798722 15801904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1288 1 393 Nodulin-like Gene Family AT5G07050 63.591 0.0 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0303 3 3407631 3416430 Mtr8g1288 8 15798722 15801904 PCT