Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1287 ATGAATAAAGCAGAAGATCTTGCAAACAATATAGAAAGTAGTGCTACACAAATTGTTGTAGAAAATGATGTAAATAATAAAGTAAATTATCTAGATTATCTTCCAGATGAAGCAAAAGAGATATTGAAATCATTAGCAAATAAATGGGAAAATGTATTGGATGCAAATGAGTTGGAAGTTATTCCTCTTAAAGGGGCAATGACCAATGAGGTATTCCAGATAAAATGGCAAACAACAGAAGGTGAAATGTCAAGAAAGGTTCTTGTTAGAATCTATGGTGAAGGTACTGACATTTTCTTTGATAGGGAAAACGAAATTCGAACATTCGCATTCATATCAAAGAATGGACAGGGACCTCGTTTGCTAGGAAGGTTTGCTCAAGGTCGCCTTGAAGAGTTCATCCGTGCAAGGACATTATCAGCACCCGATATGCGCGATCCATCTATTTCTGCTCTTATAGCCTCCAAAATGAAGGAGTTCCATGATCTTGACATGCCTGGTTCCAAGAATGTGTACCTTTGGGAAAGATTAAGAGATTGGCTTATTGAAGCGAGGCGCTTGTTGTCACCCGAAGAAGTTGAGATGTTTCATTTGAACACAATGGACAAAGAAATTTCTCTTTTGGAAAAGGAATTGTCGATAACTCCTCAACGCATAGGGTTTTGCCACAATGATTTACAATATGGTAACATCATGCTTGATGAAGTAACAAATTCTGTGACCATAATAGATTATGAGTATGCAAGTTATAATCCAGTTGCATATGATATAGCAAACCACTTCTCTGAAATGGCTGCAAATTATCATACCGAAACTCCACATATTCTCGACTATAGTAAATATCCCGATTTGGAGGAACGTCAAAGATTTGTGCATACATATTTGAGTTCATCAGGAGAGCAACCTAGTGATAATGAAGTGCAGAAACTACTTGATGAAATTGAAAAGTATACACTTGCAAGTCATCTCTTATGGGGCCTTTGGGGAATCGTTTCGGAGCATGTAAACAAAATTGATTTTGACTACAAGGAGTATGCAAAACAAAGGTTTCAAGAGTACTGGTCAAGGAAAAATCATCTTTTGAGCCCTAATGGATCTTCCCATGATAATGTTATTGATGGTAATGGGGAGGAAGCATTGGAATCAATCGTCAATAAAAAATCAGCAAAGAGCACTCCTATCTCAAGGAAGTTGAAGAAATTTTTTGGTCTTGGTTTATTCAGATCAAAACACTAG 1236 0.3681 MNKAEDLANNIESSATQIVVENDVNNKVNYLDYLPDEAKEILKSLANKWENVLDANELEVIPLKGAMTNEVFQIKWQTTEGEMSRKVLVRIYGEGTDIFFDRENEIRTFAFISKNGQGPRLLGRFAQGRLEEFIRARTLSAPDMRDPSISALIASKMKEFHDLDMPGSKNVYLWERLRDWLIEARRLLSPEEVEMFHLNTMDKEISLLEKELSITPQRIGFCHNDLQYGNIMLDEVTNSVTIIDYEYASYNPVAYDIANHFSEMAANYHTETPHILDYSKYPDLEERQRFVHTYLSSSGEQPSDNEVQKLLDEIEKYTLASHLLWGLWGIVSEHVNKIDFDYKEYAKQRFQEYWSRKNHLLSPNGSSHDNVIDGNGEEALESIVNKKSAKSTPISRKLKKFFGLGLFRSKH* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1287 411 SUPERFAMILY Protein kinase-like (PK-like) 27 359 IPR011009 -
Mtr8g1287 411 Pfam Choline/ethanolamine kinase 85 285 - -
Mtr8g1287 411 CDD ETNK_euk 58 356 - -
Mtr8g1287 411 PANTHER CHOLINE/ETHANOALAMINE KINASE 2 394 - -
Mtr8g1287 411 PANTHER CHOLINE/ETHANOLAMINE KINASE 2 394 - -
Mtr8g1287 411 Pfam Choline kinase N terminus 31 56 IPR007521 GO:0016773
Mtr8g1287 411 Gene3D Phosphorylase Kinase; domain 1 45 133 - -
Mtr8g1287 411 Gene3D - 93 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1287 Mtr-Chr8 15772540 15775256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1287 34 364 Acyl Lipid Metabolism Gene Families AT1G74320 67.674 3.13e-175 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0317 3 3664925 3670932 Mtr8g1287 8 15772540 15775256 PCT