Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1216 ATGAACATGTTAGGCCTAAGAGACTTAGTTCTCATAGCTCAAACTCCTTCATCACTTCACAACCAACAAAACCAAACCATTTCATCAGATCACAATCCAAATCTTCCCTTACCTTCATCATCAGCCTTAAGTGTTGGTCTTGGAATTTTCCCACTCCTTACCACAACTCACCCTCATCATCAAAACCCTAACAATAACAATAACAATGATAATATTCATCAAGACTCAAATTTTTGGAACCTCAAGATGTGTCAACCACAACAAGTAATGATGATGAATTCATCAAGAAAAAGAGTTGAAGAAGAAGATGATGATGTAAGAAACAAAAACTTGATGATGGGGTGTGAGGAAAATGGTGAGTTTAGGGTTTGTCAAGATTGTGGAAATAGAGCTAAGAAAGATTGTAGCTATAAAAGATGTAGGACTTGTTGTAAAGGTCGTGGATTTGATTGTAGTACTCACGTGAAGAGCACGTGGATACCGGCTTCGATGCGGCGTGACCGGAGTATGGTGGTGGCTGAAGGTGGTGACAGTGATGGTGGTGCTTCTTCTGGTACTAAGAGGCAGAAAATTTTGATGACTTCATCACAGAATAATGTTGCCGCTAACTCTCATAGTTCTAGTTCTAATGCTGCCACTAGAACAAGAAGTTTAAGCTTAGATATAACTAGCTCTTGTCACCAAGATCCTGGTTTCAAGCAGACTTTGCCGCGCTATGTTCGCGCGCCTGCTGTTTTCAAGTGCCATAGAGTTTCTGCTATTGGCAATGGTGAAGATGAACTTGCTTACTTGGCCACTGTGAATATTAGTGGCCATGTATTTAAAGGGTTTCTCTATGATCAAGGAGTTGATGACAAAAATGAAACAATGCCTTGTGTTTCAGAATTGCAACTTGGAAGTAATGGAAGTGGAAAGAGTAATAGAGAATGTTCTTCTTCTGCTATTGAGGTAGTTCTTTCTCTGGCTATGCATGGAAATCCGATAGTACTTGTGTTATTATGTAAATTCTCTACTATAATAAATTGA 1026 0.3918 MNMLGLRDLVLIAQTPSSLHNQQNQTISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQNPNNNNNNDNIHQDSNFWNLKMCQPQQVMMMNSSRKRVEEEDDDVRNKNLMMGCEENGEFRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDGGASSGTKRQKILMTSSQNNVAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQTLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDDKNETMPCVSELQLGSNGSGKSNRECSSSAIEVVLSLAMHGNPIVLVLLCKFSTIIN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1216 341 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 320 IPR007818 GO:0003700|GO:0006355
Mtr8g1216 341 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 236 283 IPR006511 -
Mtr8g1216 341 Pfam Domain of unknown function (DUF702) 123 284 - -
Mtr8g1216 341 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Mtr8g1216 341 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1216 Mtr-Chr8 14880283 14882404 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mtr8g1216 DUF702 6.1e-54 No_clan