Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1213 ATGGCTTCTTCACCTTCTTCTTCTTTGGTTGGTCCACTTCTTCTTGCTCCAAACAATGGTTATAAGGTTTGGGAAGACCCATCCTTCATCAAATGGAGAAAAAGAGACCCACATGTTCATTTGCATTGCCATGAATCTGTTGAAGGATCTCTTAAATATTGGTATCAACGAAGCAAAGTGGATTATCTGGTTTCTCAATCTGCTGTTTGGAAAGATGATGCTGTTAATGGAGCTCTTGAGAGTGCTGCTTTTTGGGTCAAAGACTTGCCTTTTGTTAAATCTTTGTCAGGGTATTGGAAATTTTTCTTGGCTTCTAATCCCTGCAATGTCCCTGCTAAATTTCATGATAGTGAGTTTCAGGATTCAGAATGGAGTACTTTACCTGTTCCTTCGAATTGGCAGCTGCATGGATTTGACCGTCCTATATATACAAATGTAACATATCCATTTCCCCTTGATCCTCCTTTCGTTCCTACTGAAAATCCAACTGGCTGCTACAGAATGGACTTCCATCTTCCTAAAGAGTGGGAAGGTAGAAGAATTTTGTTACATTTTGAAGCAGTTGATTCAGCCTTTTGTGCATGGATAAACGGCCATCCGATAGGATACAGTCAAGACAGCAGGCTACCTGCAGAGTTTGAAGTCACTGATTTTTGTCATCCATGTGGTTCAGACCTGAAGAATGTTCTGGCAGTTCAAGTGTTCAGATGGAGTGACGGGTGTTACCTTGAGGATCAAGACCATTGGCGCATGTCTGGCATCCACCGTGATGTTCTTCTTCTAGCAAAGCCAGAGGTATTTATCACCGACTATTTCTTCAAATCTAACCTCGCTGAAGATTTTTCTTCCGCGGAGATGCTGGTTGAAGTAAAAATAGATAGATTACAAGATACATCAATTGATAATGTTCTTACAAACTACACCATAGAAGCTACACTCTATGATTCTGGAAGCTGGGAATCCTCTGATGGGAATCCGGATCTCCTTTCATCTAATGTAGCCGACATAACATTCCAACCAACAACCACACCTTTAGGGTTTTATGGCTATACGCTCGTGGGAAAACTGCAATCACCAAAGCTTTGGTCAGCAGAACAGCCATACCTCTATACATTAGTTGTCGTCCTCAAAGATAAATCTGGCCGTGTGCTAGACTGTGAATCAAGTCAAGTAGGATTTAAAAATGTATCCAAAGCCCACAAACAACTGCTTGTTAATGGACATCCCGTTGTAATAAGAGGTGTGAACAGGCATGAACATCATCCAGAAGTGGGAAAGGCAAACATAGAATCCTGCATGGTCAAGGACTTGGTTTTAATGAAGCAAAACAATATCAATGCCGTGAGGAACAGCCATTATCCTCAACATCCACGTTGGTATGAGCTATGTGATTTGTTTGGCATGTACATGATAGATGAAGCCAATATTGAAACACATGGTTTTGATTATTCTAAACATCTCAAACATCCTACTCTGGAACCAATGTGGGCAACTGCAATGTTGGATCGTGTGATTGGCATGGTTGAGAGGGATAAAAATCACACATGCATTATTTCCTGGTCTCTAGGGAATGAATCTGGATTCGGAACAAATCATTTTGCTATGGCTGGTTGGATTCGAGGAAGAGATTCTTCTCGGGTTATACATTATGAAGGAGGTGGATCAAGAACCCCATGCACTGATATTGTTTGCCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCCAATGATCCTACCGAAACACGTCCTCTGATACTGTGCGAGTATTCACATGCAATGGGAAACAGCAATGGAAACTTGCATATATATTGGGAAGCAATTGACAACACATTTGGACTCCAAGGAGGCTTTATATGGGATTGGGTTGATCAGGCTCTTCGGAAGGTTCAAGCAGATGGTACAAAGCAATGGGCATATGGAGGTGAATTTGGAGATATTCCAAATGATTTGAATTTTTGTTTGAACGGTCTTGTATGGCCTGATCGAACTGCTCATCCTGTTTTACATGAAGTGAAGTTCTTATACCAACCAATCAAGGTGAATTTAAGTGACGGCAAATTAGAGATAAAAAACACCCATTTTTTTCAAACCACTGAAGGGTTGGAGTTCAGCTGGTATATTTCAGCAGATGGATACAAACTGGGATCTGATAAGTTGAGTCTTCCTCCAATAAAGCCGCAGAGCAATTATGTCTTTGATTGGAAATCGGGTCCATGGTATTCTCTATGGGATTCATCATCATCGGAGGAAATATTTTTGACAATTACGGCTAAGCTTTTGAACTCTACGCGCTGGGTTGAAGCTGGTCATGTTGTTACTACTGCTCAAGTTCAACTGCCAGCTAAGAGAGACATTGTTCCTCATGTAAGGGCTATCAATATTGGTAGTGGCAATCTAGTCGTTGAAACACTTGGAGATACAATCAAAGTCAGCCAGCAAGATGTTTGGGACATAACATTCAACACTAAAACAGGTTTAATTGAAAGCTGGAAGGTAAAAGGAGTACATGTTATGAATAAGGGCATACACCCGTGTTTCTGGCGAGCTTCCATTGACAATGATAAAGGAGGAGGAGCTGATAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATTGATAGTGTCCACTTTATTGCTGAGAGCTGTTCTGTGCAGAGTACGACAGGAAATGCGGTTAAACTGTTGGTGGTTTTCCATGGTGTTACCAAGGGCGAGGAGGGTTCTCTTCCAAACCAGGACAAATCAAAGGTTTTATTTACAACAGAAATGACATACACAATTTATGCTTCTGGGGATGTCATTTTGGAATGCAATGTGAAACCAAATGCTGATCTTCCTCCTTTGCCTCGCGTGGGAATTGAGATGAACTTGGAAAAATCATTAGATCAAGTAAGTTGGTACGGAAGAGGGCCGTTTGAGTGTTATCCAGATAGAAAGGCTGCTGCGCAGGTTGCGGTCTATGAGAAGAGTGTAGATGAGTTGCATGTTCCTTATATTGTTCCCGGGGAATCTGGTGGTAGGGCAGATGTTAGATGGGCAACATTCTTGAACAAAAATGGTTTTGGAATATATACTTCAAAATATGGTAGTTCTCCACCCATGCAAATGAGTGCAAGCTACTATAGCACTTCAGAACTTGACCGGGCCGGACACGATTATGAGCTGGTTAAAGGAGATAACATTGAGGTTCATCTAGACCACAAGCACATGGGTTTGGGTGGAGACGATAGTTGGTCTCCATGTGTTCACGACCAATATTTGGTTCCTCCGGTGCCGTATTCCTTCTCTGTCAGGTTGTCTCCGGTAACTCCGGCTACTTCTGGTCATGACATCTACAGATCACAGCTTCAAAACTCTTGA 3363 0.4184 MASSPSSSLVGPLLLAPNNGYKVWEDPSFIKWRKRDPHVHLHCHESVEGSLKYWYQRSKVDYLVSQSAVWKDDAVNGALESAAFWVKDLPFVKSLSGYWKFFLASNPCNVPAKFHDSEFQDSEWSTLPVPSNWQLHGFDRPIYTNVTYPFPLDPPFVPTENPTGCYRMDFHLPKEWEGRRILLHFEAVDSAFCAWINGHPIGYSQDSRLPAEFEVTDFCHPCGSDLKNVLAVQVFRWSDGCYLEDQDHWRMSGIHRDVLLLAKPEVFITDYFFKSNLAEDFSSAEMLVEVKIDRLQDTSIDNVLTNYTIEATLYDSGSWESSDGNPDLLSSNVADITFQPTTTPLGFYGYTLVGKLQSPKLWSAEQPYLYTLVVVLKDKSGRVLDCESSQVGFKNVSKAHKQLLVNGHPVVIRGVNRHEHHPEVGKANIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHPTLEPMWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFAMAGWIRGRDSSRVIHYEGGGSRTPCTDIVCPMYMRVWDMLKIANDPTETRPLILCEYSHAMGNSNGNLHIYWEAIDNTFGLQGGFIWDWVDQALRKVQADGTKQWAYGGEFGDIPNDLNFCLNGLVWPDRTAHPVLHEVKFLYQPIKVNLSDGKLEIKNTHFFQTTEGLEFSWYISADGYKLGSDKLSLPPIKPQSNYVFDWKSGPWYSLWDSSSSEEIFLTITAKLLNSTRWVEAGHVVTTAQVQLPAKRDIVPHVRAINIGSGNLVVETLGDTIKVSQQDVWDITFNTKTGLIESWKVKGVHVMNKGIHPCFWRASIDNDKGGGADSYLSRWKAAGIDSVHFIAESCSVQSTTGNAVKLLVVFHGVTKGEEGSLPNQDKSKVLFTTEMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAAAQVAVYEKSVDELHVPYIVPGESGGRADVRWATFLNKNGFGIYTSKYGSSPPMQMSASYYSTSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDDSWSPCVHDQYLVPPVPYSFSVRLSPVTPATSGHDIYRSQLQNS* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1213 1120 Gene3D - 800 1101 IPR014718 GO:0030246
Mtr8g1213 1120 Pfam Beta-galactosidase, domain 4 689 782 IPR032312 -
Mtr8g1213 1120 Pfam Glycosyl hydrolases family 2, TIM barrel domain 400 681 IPR006103 GO:0004553|GO:0005975
Mtr8g1213 1120 Pfam Glycosyl hydrolases family 2, sugar binding domain 93 264 IPR006104 GO:0004553|GO:0005975
Mtr8g1213 1120 SMART Bgal_small_N_2 811 1101 IPR004199 GO:0004565|GO:0005975|GO:0009341
Mtr8g1213 1120 Gene3D Immunoglobulins 678 786 IPR013783 -
Mtr8g1213 1120 Gene3D - 16 264 - -
Mtr8g1213 1120 SUPERFAMILY Galactose mutarotase-like 804 1103 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mtr8g1213 1120 Pfam Glycosyl hydrolases family 2 266 394 IPR006102 GO:0004553|GO:0005975
Mtr8g1213 1120 PANTHER GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN 14 1105 - -
Mtr8g1213 1120 PRINTS Glycosyl hydrolase family 2 signature 188 203 IPR006101 GO:0004553|GO:0005975
Mtr8g1213 1120 PRINTS Glycosyl hydrolase family 2 signature 405 419 IPR006101 GO:0004553|GO:0005975
Mtr8g1213 1120 PRINTS Glycosyl hydrolase family 2 signature 436 454 IPR006101 GO:0004553|GO:0005975
Mtr8g1213 1120 PRINTS Glycosyl hydrolase family 2 signature 511 526 IPR006101 GO:0004553|GO:0005975
Mtr8g1213 1120 PRINTS Glycosyl hydrolase family 2 signature 584 599 IPR006101 GO:0004553|GO:0005975
Mtr8g1213 1120 SUPERFAMILY beta-Galactosidase/glucuronidase domain 674 784 IPR036156 -
Mtr8g1213 1120 SUPERFAMILY (Trans)glycosidases 399 678 IPR017853 -
Mtr8g1213 1120 SUPERFAMILY Galactose-binding domain-like 92 264 IPR008979 -
Mtr8g1213 1120 Gene3D Glycosidases 396 676 - -
Mtr8g1213 1120 PANTHER BETA-GALACTOSIDASE 14 1105 - -
Mtr8g1213 1120 SUPERFAMILY beta-Galactosidase/glucuronidase domain 266 393 IPR036156 -
Mtr8g1213 1120 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 511 525 IPR023232 -
Mtr8g1213 1120 Pfam Beta galactosidase small chain 816 1100 IPR004199 GO:0004565|GO:0005975|GO:0009341
Mtr8g1213 1120 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 446 471 IPR023230 -
Mtr8g1213 1120 Gene3D Immunoglobulins 265 394 IPR013783 -