Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1204 ATGGGCATGGCAGCTGAGAATCAGTTCCATGTTTTGGCTGTTGATGATAGTATTATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACTTCTTCTTTTAATGTTACTACAGTGGATTCTGCTAGTAAGGCCTTGAAATTTCTTGGTTTGGTTGAAGATGAAATGAGGACTTATGACACTCATGTTGCTTCAGAAATTAATCAGGATGTAGATGTAAATCTGATCATAACAGATTATTGTATGCCAGGGATGACTGGCTATGATCTGTTGAGAAAAATTAAGGAATCCAAATCATTCAAAGACATACCAGTTGTGATAATGTCCTCGGAGAATGTTCCATCTAGGATCAACAGATGTTTGGAAGAGGGGGCTGAAGAATTCTTCCTGAAACCAGTTCAACTATCAGATGTAAGCAAGCTGAAGCCACATTTGTTGAAATCAAAAGTTAAGGAAGAGAATGAACAACCTATCAAAAGGAAGGGTATGGAAGAAACTCAATCACCAGATAAAACTAGGCCAAAAGTTAGCATTTAA 534 0.3727 MGMAAENQFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTYDTHVASEINQDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVSKLKPHLLKSKVKEENEQPIKRKGMEETQSPDKTRPKVSI* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1204 177 Gene3D - 10 174 - -
Mtr8g1204 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 173 IPR045279 GO:0009736
Mtr8g1204 177 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Mtr8g1204 177 CDD REC_typeA_ARR 11 140 - -
Mtr8g1204 177 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Mtr8g1204 177 SMART REC_2 9 144 IPR001789 GO:0000160
Mtr8g1204 177 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 173 - -
Mtr8g1204 177 MobiDBLite consensus disorder prediction 145 177 - -
Mtr8g1204 177 SUPERFAMILY CheY-like 8 146 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1204 Mtr-Chr8 14691596 14693218 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr8g1204 Response_reg 2.6e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1204 8 14691596 14693218 Mtr3g0734 3 10202884 10207364 PCT