Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1199 | ATGATGTACAATGACCCTCATAACCCTCAACACCAACAACACCAACAGCACCAGCAGCAACAGCAACAACAACAACAACAGTATCAGCAACACCAGCAGCAGCAGCAGCCTCCGCATTTTCACCATCAGCAGCAGCAGCAGCAGTCAGGTCCCGGTCCGGATTTCCACCGTGGACCTCCGCCGCCGATGCCTCAACAACCTCCGCCTATGATGCGCCAACCTTCCGCTTCTTCGACGAATCTCGGATCGGAGTTTCTTCCTGGTGGTCCCCCTGGTCCCCCTGGTCCTCCTCCTCATTACGATGTTCATAATGATAGCCATGGTGCAAAAAGAATGAGAAAGCTCACTCAAAGGAAGGCAGTTGATTATACGAGCACAGTTGTGCGCTATATGCAGATTCGTATGTCACAGCGTGATTCCAGAGATAGGACAGTACTTCAACCTACGCCGGCAGCAGCAATTGATATGTTGCCAGCAGCTGGCTATTCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGTGCTATTAATTGTGTTCTTTGGACTCCTACAGGCCGGCGTCTTATTACTGGCTCACAGACCGGGGAATTTACTCTTTGGAATGGACAGTCTTTTAATTTCGAAATGATACTTCAGGCTCATGATTCAGCAATCAGATCCATGATCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGGGGTGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTTTGTAGGACAGATTTGAAGTTCTGTTCGTGTTCTGATGATACCACAGTTAAAGTTTGGGATTTCGCACGCTGTCAAGAAGAGTGTTCATTAACCGGCCACGGTTGGGATGTGAAGAGTGTTGACTGGCATCCAACAAAATCTCTATTAGTATCAGGTGGGAAAGACAATCTTGTGAAACTTTGGGATGCTAAAAGCGGGAAAGAGCTCTCCTCCTTTCATGGCCACAAAAACACCGTGCTTTGTGTGAAATGGAATCAAAATGGAAACTGGGTATTAACGGCTTCTAAAGATCAAATAATAAAGCTGTATGACATAAGAGCAATGAAGGAGCTTGAATCATTCCGTGGACACCGGAAGGATGTTACTACTTTGGCTTGGCATCCGTTCCATGAAGAGTACTTTGTCAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCAAGATACTCCTCAAATTGAAATTTCCAACGCTCATGATAATAATGTGTGGGATCTTGCATGGCATCCTATTGGATATCTTCTTTGCAGTGGTAGCAGTGATCATACAACAAAGTTTTGGTCTAGAAACAGGCCGGGAGATAGTGCCCGTGATAGTAGATATAACAATGGCATTCAAGGATATGCCGAGCAAAATCCTGTTGCTGGTCGTGTACCTGGCCATTTTGTAATGCCTGAAGGCCCAACAACTCCAGGACCATTTCCCCCTGGGCTGATGACTCGAAATGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTTTTGATGGGTCTCAAGGGGAGCAGAAGCAGCCCCATCCTGGTTCAATAGGTGCTCCTCCTCTTCCCCCGGGTCCACATCCCTCTCTTCTTAACCCCAACCAACAACAACCATTCCAACAGAATCCACAGCAGATTCCACAACATCAGCAACAGCTACAACAACATATGGGCCCTTTGCCTATGCCTCCAAATATGCCACAGATACAACACTCTTCCCATTCCTCTATGCTCCCTCACCAACATTTGCCCCGCCCTCCCCCCCAAATGCCACATGGAATGCCAGGATCTTTACCAGTGCCTACATCTCATCCAATGCCAATTCCAGGACCTATGGGGATGCAAGGTACAATGAATCAGATGGGCCCTCCAATGCCACAAGGTCATTATGGGGGCATGAATCAAATGCATTCAGGATCCTTGTCTTCAAGTGGAGGACCACCTATGGGAGGCTTCCCAAACAATATGCAAGGGCCACCAAATAACAATTATCCTCAAGGTGCTCCATTTAACAGACCACAAGGTGGACAAATGCCCATGATGCAAGGTTATAATCCTTACCAGTCTGGAAATCAACCTGGGATGCCTCCAAACTCACAACAAGGTGGACCACACTCTCAAATGCCTCAATGA | 2238 | 0.4651 | MMYNDPHNPQHQQHQQHQQQQQQQQQQYQQHQQQQQPPHFHHQQQQQQSGPGPDFHRGPPPPMPQQPPPMMRQPSASSTNLGSEFLPGGPPGPPGPPPHYDVHNDSHGAKRMRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVLQPTPAAAIDMLPAAGYSDNPSTSFAAKFVHTSLNKNRCAINCVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDSAIRSMIWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELSSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGQDTPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWSRNRPGDSARDSRYNNGIQGYAEQNPVAGRVPGHFVMPEGPTTPGPFPPGLMTRNEGTIPGVGVAMPLSIPSFDGSQGEQKQPHPGSIGAPPLPPGPHPSLLNPNQQQPFQQNPQQIPQHQQQLQQHMGPLPMPPNMPQIQHSSHSSMLPHQHLPRPPPQMPHGMPGSLPVPTSHPMPIPGPMGMQGTMNQMGPPMPQGHYGGMNQMHSGSLSSSGGPPMGGFPNNMQGPPNNNYPQGAPFNRPQGGQMPMMQGYNPYQSGNQPGMPPNSQQGGPHSQMPQ* | 746 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 522 | 629 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 54 | 71 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 716 | 745 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 263 | 295 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 305 | 346 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 389 | 421 | - | - | |
| Mtr8g1199 | 745 | PRINTS | G protein beta WD-40 repeat signature | 282 | 296 | IPR020472 | - | |
| Mtr8g1199 | 745 | PRINTS | G protein beta WD-40 repeat signature | 324 | 338 | IPR020472 | - | |
| Mtr8g1199 | 745 | PRINTS | G protein beta WD-40 repeat signature | 452 | 466 | IPR020472 | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 347 | 381 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 389 | 421 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | PANTHER | WD40 REPEAT PROTEIN | 99 | 741 | IPR045245 | GO:0031124 | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 263 | 295 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 341 | 379 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 385 | 421 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 303 | 337 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 435 | 465 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 219 | 252 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | Pfam | WD domain, G-beta repeat | 264 | 295 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 324 | 338 | IPR019775 | - | |
| Mtr8g1199 | 745 | SUPERFAMILY | WD40 repeat-like | 176 | 467 | IPR036322 | GO:0005515 | |
| Mtr8g1199 | 745 | Coils | Coil | 14 | 34 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 305 | 342 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 668 | 705 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 567 | 593 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 221 | 253 | - | - | |
| Mtr8g1199 | 745 | Gene3D | - | 335 | 480 | IPR015943 | GO:0005515 | |
| Mtr8g1199 | 745 | Gene3D | - | 174 | 334 | IPR015943 | GO:0005515 | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 179 | 211 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | CDD | WD40 | 183 | 465 | - | - | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 425 | 465 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 382 | 422 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 214 | 253 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 167 | 211 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 256 | 295 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 298 | 337 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | SMART | WD40_4 | 340 | 379 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 660 | 745 | - | - | |
| Mtr8g1199 | 745 | MobiDBLite | consensus disorder prediction | 551 | 566 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 347 | 388 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 433 | 465 | IPR001680 | GO:0005515 | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 433 | 465 | - | - | |
| Mtr8g1199 | 745 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 221 | 253 | IPR001680 | GO:0005515 |