Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1186 ATGGCATTCAATCAAGAGTTAGAAGCTATAACTCAAGCTTTCTCAGGACATGGGGTGGATGAGAAATCATTGATAGCAGTATTGGGAAAATGGGATCCTTTGGAGAGAGAAACTTATAGGAAGAAGACATCACATTTCTTCATTGAAGATCATGAACGCCAATTTCAAAGGTGGAATGATCATTGTGTTCGTCTTCTCAAACATGAGTTTGTGCGTTTTAAGAATGCAGTGGTGCTTTGGAGCATGCACCCTTGGGAAAGAGATGCCCGTTTAGCAAAAGAGGCCCTAAAGAAAGGCTCAATTTCATATGGTGTACTGATTGAGATTGCATGCACAAGATCTTCAGAGGAACTATTGGGAGCTAGGAAGGCATACCATTCCCTCTTTGACCATTCCATTGAAGAAGATGTTGCATCTCACATCCATGGCAATGATAGAAAGCTCTTGGTTGCACTTGTGAGTGCCTATAGATATGAAGGAACAAAGGTTAAAGATGACACTGCAAAATCAGAGGCTAAAACACTTTCCAATGCCATTAAGAATGCTCAAAACAAGCCAATTGTTGAGGATGATGAAGTAATAAGGATATTGGCAACAAGAAGCAAGCTACATCTTCAAGCAGTTTACAAGCACTATAAAGAGATTTCTGGGAAGAATCTTGAAGAGGATCTTAATGACTTAAGGTTTAAAGAGACTGTGCAATGCCTTTGTACTCCACAAGTATATTTTAGCAAGGTTTTGGATGCAGCATTGAAAAATGATGTGAATAAGAATATCAAGAAATCACTTACTCGTGTGATTGTTACTAGAGCTGACATTGATATGAAGGAGATAAAGGCTGAGTATAATAACTTATATGGAGTTTCTTTACCTCAGAAAATTGAAGAGACTGCTAAAGGGAACTACAAGGATTTCTTGCTAACCTTGATTGCCAGAGGAGGCTAA 945 0.3873 MAFNQELEAITQAFSGHGVDEKSLIAVLGKWDPLERETYRKKTSHFFIEDHERQFQRWNDHCVRLLKHEFVRFKNAVVLWSMHPWERDARLAKEALKKGSISYGVLIEIACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGNDRKLLVALVSAYRYEGTKVKDDTAKSEAKTLSNAIKNAQNKPIVEDDEVIRILATRSKLHLQAVYKHYKEISGKNLEEDLNDLRFKETVQCLCTPQVYFSKVLDAALKNDVNKNIKKSLTRVIVTRADIDMKEIKAEYNNLYGVSLPQKIEETAKGNYKDFLLTLIARGG* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1186 314 Pfam Annexin 172 225 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 Pfam Annexin 260 309 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 Gene3D Annexin 151 241 IPR037104 GO:0005509|GO:0005544
Mtr8g1186 314 PANTHER ANNEXIN 3 313 - -
Mtr8g1186 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 ProSiteProfiles Annexin repeat profile. 166 252 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 PANTHER ANNEXIN D4 3 313 - -
Mtr8g1186 314 Coils Coil 165 185 - -
Mtr8g1186 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Mtr8g1186 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Mtr8g1186 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Mtr8g1186 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Mtr8g1186 314 Gene3D Annexin 83 150 IPR037104 GO:0005509|GO:0005544
Mtr8g1186 314 Gene3D Annexin 242 311 IPR037104 GO:0005509|GO:0005544
Mtr8g1186 314 SUPERFAMILY Annexin 4 311 IPR037104 GO:0005509|GO:0005544
Mtr8g1186 314 SMART annex3 102 152 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Mtr8g1186 314 SMART annex3 188 236 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1186 Mtr-Chr8 14514507 14518404 Dispersed/Tandem