Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1173 ATGGGCGCTGCGTGTTGTGTTTCAGCCAGAGATAAAACTATTCAAAGTGGACCAACCAGTGAAGTCTGGCATAGGAATGCTCGGTGTTCCCCAACATGGAGCTTGCGATGGGATCATAGAAGCCGTGTAGCTGGAGAAGATACTTCTATAAATTGGTTTTCTGACGGTGTTAGCAGCAATGACAGATTGGAGAATAAAAATGAATCACATGTATCCGAGGATGGAAGCCCGTTGCAGAGTTATCAAAGGAATAGATGGCAAAAGTCCCCAATCTCTGAAGGAACTGCTCAACATACAAAATCATTTTCTGATCAATCTATTTCAAGGAATGTTTCCATAGATGGGAGAATGGAACAGGTGAATGAATTGGAAGAATCAGCGGCAGCATCAATATCTTGTCCATTTCCTACAAAAACTTCACCTACATTGTCTTCTACTTCGTTGTCAATATCTCCTCTGCCATCCCAAAGCCGCCTACCTCCATCCAGCTCAACACCATCAAAGTGGCCCTCCCATTCTAGAGGATTCCAGTTATCACGGCAAGTTTCTGATAGCCGGATCATGGGATTTAAGTCACCTAGCAGCTTTTATGCATCTGAAGAAAGGCCGGTGTTTCCTTCACGGAGCAATGAATATGGTATGCACTCTGGCGGGGGATCTTCAGATTATTGTTCTAGGCCTGGCTTTACTGAGCTGATGGGCAATCCTCACATGGAAAGATGGTCAGTTGATAGCGAGTCATTTGGTTTTAATTGTGATAGGTTGGCTAGATTCAGTAGCCGGTTTTCAACTTCTCCAGTTGATTTGCAAACATGTGGTGTTTGCTCAAATCATTTAACTGAAAAGTCTTCTTGGAGCACTCAAAAGATTATTGCAAACAATGACCTGTCTGTAGTTTCTGTTCTTATTTGTGGACACGTCTATCATGCCGAATGTTTAGAGAGTATAACACCTGAAATCAACAAGTATGATCCAGCTTGCCCAGTTTGCACTTTTGGTGAGAAACAAACTCGTAAATTGTTTGAAAAAGCTATGAAAGCTGAAATGGATTCAAAAGCTAGAAATAAGAAATCAAGGAACCAAATTTTGGATAATGAGATTGACGATGATGATGATGATTCTGTTGTATTTGATCAGTTTAAAGATAAAAGGCGTCAAAATAAAGGTCCTAGAATGGACTCTAGTTCTAGCAAAAGAAGCTCTTCTGGGAAACCTTTTCTGAGTAGACATTTCTCATTTGGCTCAAAGGGTTCCAAAAGCATGTTAGATAATCACCCAACCCGAAAGAAGGGCTTTTTTTGGGCGAAGTCTAGCAAGGAATAA 1323 0.4119 MGAACCVSARDKTIQSGPTSEVWHRNARCSPTWSLRWDHRSRVAGEDTSINWFSDGVSSNDRLENKNESHVSEDGSPLQSYQRNRWQKSPISEGTAQHTKSFSDQSISRNVSIDGRMEQVNELEESAAASISCPFPTKTSPTLSSTSLSISPLPSQSRLPPSSSTPSKWPSHSRGFQLSRQVSDSRIMGFKSPSSFYASEERPVFPSRSNEYGMHSGGGSSDYCSRPGFTELMGNPHMERWSVDSESFGFNCDRLARFSSRFSTSPVDLQTCGVCSNHLTEKSSWSTQKIIANNDLSVVSVLICGHVYHAECLESITPEINKYDPACPVCTFGEKQTRKLFEKAMKAEMDSKARNKKSRNQILDNEIDDDDDDSVVFDQFKDKRRQNKGPRMDSSSSKRSSSGKPFLSRHFSFGSKGSKSMLDNHPTRKKGFFWAKSSKE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1173 440 MobiDBLite consensus disorder prediction 379 440 - -
Mtr8g1173 440 SMART ring_2 272 330 IPR001841 -
Mtr8g1173 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 332 IPR013083 -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 393 421 - -
Mtr8g1173 440 PANTHER BNAA09G43140D PROTEIN 1 434 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 128 182 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 72 109 - -
Mtr8g1173 440 ProSiteProfiles Zinc finger RING-type profile. 272 331 IPR001841 -
Mtr8g1173 440 PANTHER EXPRESSED PROTEIN 1 434 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 348 367 - -
Mtr8g1173 440 SUPERFAMILY RING/U-box 271 331 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 422 440 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 132 182 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 348 364 - -
Mtr8g1173 440 MobiDBLite consensus disorder prediction 55 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1173 Mtr-Chr8 14342639 14348383 Dispersed/Transposed