Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1172 ATGGCTATCCTCCTGGTCATTCTTCTCTTATCTTTTTCTTCACCTTCATTAGCTCTTCCTTCTTCGTCTCCAAGTTTCGTTCCAAAAGATAGTTTTCTTATTGATTGTGGTTCTGAAAATGTAGTTACTTTACCTGATGGTAGACAATTCAAATCAGATCCACAAGCAAATTCATTTTTACAAGCTAAGGATGATTACAAAGTTTCAGCAACTGATGCTGATGTTCCTTCACCTATATATTCAACTGCTAGAATTTTCATTCAAGAAGCTAAGTATTCATTCCATTTGGTTCAGCCTGGTTTTCATTGGATTCGCCTTCATTTCTATCCTATCAAAAACAGCGTTTTCGATCTTCAAAAGGCCACGTTTTCTGTCAACACAAATACTTTTGTTCTTCTTCATAGCTTCAATGTGAATAACACTGACAAAGCAATCCTCAAAGAATATCTCATCAATGCAACAGAACCACAGTTGATGTTGTCCTTCATTCCTTTGAAGAATTCGGCTGCGTTTATCAATGCAATCGAGGTTGTTACGGCGCCAGATAGCCTAATCGTTGACACCGGCTCGGGACTTTTCCCAGTCGCCCCGGTTAACGGATTAACAGCCTATGCTTTCCAGCCTGTTTTTAGGTTGAACAATGGAGGACCTCTAATTACATCAGCAAATGATACACTTGGAAGAATTTGGGAATCTGATGAACCTTATCTTACAAATAAGAATCTTGGAAAGAGTGTTACTGTTGCTACTAATGTTGTTAAGTTTCCTCAAGACAATCCGGATATTTCGCCTTTGATTGCACCACAAACTGTTTATTCTTCTGCCACTGAGATGGGTAATGCTGATGTGAGTCTACCAAATTTCAATGTGTCATGGAAATTTGATGTTGACACTTCTTTTAGTTACCTTGTTAGGTTGCATTTTTGTGACATTGTGAGCAAAGGACTTAATCAACTTTACTTCAATGTTTATGTCAATGGAAAAACTGCAATTGCTAATTTGGATTTATCAGCTATAAATGGTGCATTGGCAACACCATATTATAAAGATTTTGTTGTGAATGCAACATTGATGACTCAAGGATTGAGTGTTCAAATTGGTCCTGCAGATGCTAATGGTGGAAATGCTAATGCAATTATGAATGGTATTGAGGTTTTGAAGATAAGCAACACAGTGAATAGTTTGGATGGTGAGTTTGGTGTTGATGGAAGGAGAGTTGGTGGTTCGAACCGTGGAACGGTTGCAGCGGTCGGTTTTGCTATGATGTTTGGAGCATTTGTTGGTCTTGGTGCTATGGTGATCAAGTGGCATAAGAGGCCTCAAGATTGGCAAAAGAGGAATAGTTTCTCTTCATGGTTGCTTCCTTTACACGCCGGCGACACAAGTTTCATGAGTAGCAAGAATTCAATAGGGAAAAGCAACATTTTCTCATCATCAATGGGATTAGGAAGGATTTTCTCCTTTTCAGAAATACAAGAAGCAACAAAGAATTTTGACTCCAAAAACATTATTGGTGTTGGTGGTTTTGGTAATGTTTATTTAGGTGTGATTGATGAAGGGGTTCAAGTTGCTGTCAAGAGAGGAAATCCACAATCAGAACAAGGTATCAATGAATTCCAGACTGAAATCCAAATGTTGTCTAAGCTTAGACATAGACATTTGGTTTCAATGATTGGATATTGTGATGAAAATGAAGAAATGATTCTTGTTTATGAGTACATGCCTAATGGACATCTTAGAGATCATCTTTATGGAAAGAACATGCCAGCACTTTCTTGGAAACAAAGGTTGGACATTTGCATTGGATCGGCAAGAGGTCTTCATTACCTTCACACTGGTACGGCACAAGGAATCATTCATCGCGACGTTAAGACAACAAACATCTTGCTTGATGAGAATTTCACGGCTAAGGTATCCGATTTTGGACTTTCAAAAGACGCGCCTATGGGACAAGGTCACGTTAGTACCGCCGTGAAAGGTAGTTTTGGTTATCTTGACCCTGAGTACTTCAGGAGACAACAATTGACCGAAAAGTCTGATGTTTACTCGTTCGGAGTAGTCCTGCTCGAGGCATTGTGCGCCAGGCCAGCTATTAACCCTCAGTTACCTAGAGAACAAGTTAACTTAGCTGATTGGGCTATGCAATGGAAGAGAAAGGGTTTGCTTGATAAAATCATTGACCCTCTTCTTGTCGGTTCGATTAATCCCGAATCTATGAAGAAATTTGCCGAGGCTGCTGAGAAATGTTTGGCTGATCATGGTGTTGATAGGCCTTCAATGGGAGATGTTCTTTGGAATTTGGAATATGCATTGCAGCTTCAAGAAGCTTTTACACAAGGAAAAGTTGAGGATGAGAATGAGGCTAAATCTGCTGCTGTTGTTGTTCCTACTTCACCTGCTCCTCCTACTACACCCCCCTCTGTTACTGATTGTCCCCCCACACCTCCTCAACAAGAAGTAAATAATAGTCCTGCTGAAGTTCAAGCTATTGATGGCCATTCTGGAACTGCAATGTTTGCACAGTTTAGTAATCTTAATGGAAGGTGA 2547 0.3977 MAILLVILLLSFSSPSLALPSSSPSFVPKDSFLIDCGSENVVTLPDGRQFKSDPQANSFLQAKDDYKVSATDADVPSPIYSTARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNSVFDLQKATFSVNTNTFVLLHSFNVNNTDKAILKEYLINATEPQLMLSFIPLKNSAAFINAIEVVTAPDSLIVDTGSGLFPVAPVNGLTAYAFQPVFRLNNGGPLITSANDTLGRIWESDEPYLTNKNLGKSVTVATNVVKFPQDNPDISPLIAPQTVYSSATEMGNADVSLPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNQLYFNVYVNGKTAIANLDLSAINGALATPYYKDFVVNATLMTQGLSVQIGPADANGGNANAIMNGIEVLKISNTVNSLDGEFGVDGRRVGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSIGKSNIFSSSMGLGRIFSFSEIQEATKNFDSKNIIGVGGFGNVYLGVIDEGVQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSMIGYCDENEEMILVYEYMPNGHLRDHLYGKNMPALSWKQRLDICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKVEDENEAKSAAVVVPTSPAPPTTPPSVTDCPPTPPQQEVNNSPAEVQAIDGHSGTAMFAQFSNLNGR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1172 848 Pfam Protein tyrosine and serine/threonine kinase 501 695 IPR001245 GO:0004672|GO:0006468
Mtr8g1172 848 MobiDBLite consensus disorder prediction 795 821 - -
Mtr8g1172 848 Gene3D - 206 390 - -
Mtr8g1172 848 Gene3D - 31 181 - -
Mtr8g1172 848 SMART serkin_6 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1172 848 SUPERFAMILY Protein kinase-like (PK-like) 473 768 IPR011009 -
Mtr8g1172 848 MobiDBLite consensus disorder prediction 798 819 - -
Mtr8g1172 848 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Mtr8g1172 848 CDD STKc_IRAK 504 768 - -
Mtr8g1172 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mtr8g1172 848 Pfam Malectin-like domain 34 387 IPR024788 -
Mtr8g1172 848 Gene3D Transferase(Phosphotransferase) domain 1 574 795 - -
Mtr8g1172 848 PANTHER OS07G0166700 PROTEIN 17 810 IPR045272 GO:0004714|GO:0006468
Mtr8g1172 848 ProSiteProfiles Protein kinase domain profile. 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1172 848 PANTHER BNAC03G60370D PROTEIN 17 810 - -
Mtr8g1172 848 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1172 Mtr-Chr8 14327392 14330212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr8g1172 Malectin_like 5.5e-39 CL0202