Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1171 ATGGCTTCTTCCATTATCAAAGATGCAAAAGTTCTCATGGTTGGTGCTGGTGGAATTGGTTGCGAGCTTCTCAAAACTCTCGCTCTCTCTGGCTTCTCTGAAATACACATCATTGACATGGACACTATAGAAGTCAGTAACCTGAACAGACAGTTTTTGTTTCGACAATCCCATGTTGGGCAGTCCAAGGCTAAAGTTGCTAGGGATGCTGTTTTAAAATTTAGGCCCAAGATAAACATTACATCATATCATGCAAATGTCAAAGATCCTGATTTCAATGTGGACTTCTTTAAGCAATTTAATGTTGTTCTTAATGGGCTGGACAACCTAGATGCACGGCGACATGTGAATCGTTTGTGCTTGGCAGCTGATGTTCCTTTAGTTGAAAGTGGAACTACTGGGTTCCTTGGTCAGGTTACAGTTCATGTCAAAGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCAGCTCCAAAGACATATCCAGTCTGTACTATCACAAGTACCCCATCAAAGTTTGTTCACTGTATTGTGTGGGCAAAAGAACTACTATTTTCTAAGTTATTTGGCGACAAAAATCAAGACAATGATTTAAATGTTCGCTCAAGCGATGCTGCCAGCTCATCAAAAAACATAGAGGATATATTTGAACATAGCAAAGATGAAGACATCGGTCAATATGGAAAGAAAATATTTGATCACGTATTTGGGTATAATATTGAATTAGCTTTGTCCAATGAAGAGACATGGAAAAATCGAAATAGACCTAAACCTATATACAGCAAGGATGTCCTGTCTGATGAATTGGATAAACAGAATGGAGATCTGGACAATGATAATGCTTGTGGCGATGGATTTTCAGTTTCTGCCATGTCATCTTTGGGCATGAAGAACCCGCAAGATATCTGGAGTCTTAAAGAAAATTCTAGAGTATTTCTCGAAGCATTGAGACTATTTTTCACAAAAAGAGAAAAGGATATTGGCAATCTGAGCTTTGATAAAGATGACCAGTTGGCTGTAGAATTTGTTACTGCAGCTGCAAACATACGTGCTGCTTCATTTGGCATACCTTTACATAGTCTTTTTGAAGCTAAAGGAATTGCTGGTAACATTGTGCATGCTGTGGCGACAACAAATGCTGTTATTGCTGGTTTGATTGTCATTGAAGCAATCAAGGTGCTGAAAAATGACATTAAAAGTTATAGAATGACATATTGTCTGGAACATCCAGCAAGAAACACTCTGCTTATGCCAGTGGAGCCATTTGAGCCTAACAAATCATGTTATGTTTGTTCTGAGAGTCCTGTATTGCTTGAAATAAACACAAACCGTTCAAAGTTGAAGGATGTTGTCGAAAAGATCATCAAGGCTAAGCTTGGGATGAGCCTTCCACTTGTTATGAACGCTTCAAACCTCCTCTATGAAGCTGGTGATATTGAGGATGACATGGTCGCAATTTATAATGCCAACCTTGAAAAGGTCCTAGCTGAGCTTCCTTCTCCTGTAACTGGTGGTACAATGCTTACAGTAGAGGATTTTCAACAGGAATTGAAGTGCAACATTAACATAAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCTGATGGTATGGTACTCTCAGGATGGACTCAACCAGTCGCAGCAGCTGAAAATGAAGACAAATCTGTTAGTAACGGTGCGAACACCTCAGACGCACCAATAACCGAAGTAGAAAAATCTGAAAATGATGATGATGTTGGTATAATTTCTCCGGTGAAGAAAAGAAAGCTTCCTGATGATTCTGATAAGTCGAACACTGCTGATGACGAAAGGCATCACAAGAAATTGCAAGTAATCGATGATGAAGACGATCTTGTCATGCTCGATGGGAATTTAGATGGGTTTAAAAAGAGAAGAGTGTCATAG 1908 0.3941 MASSIIKDAKVLMVGAGGIGCELLKTLALSGFSEIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPKINITSYHANVKDPDFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKELLFSKLFGDKNQDNDLNVRSSDAASSSKNIEDIFEHSKDEDIGQYGKKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELDKQNGDLDNDNACGDGFSVSAMSSLGMKNPQDIWSLKENSRVFLEALRLFFTKREKDIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLKNDIKSYRMTYCLEHPARNTLLMPVEPFEPNKSCYVCSESPVLLEINTNRSKLKDVVEKIIKAKLGMSLPLVMNASNLLYEAGDIEDDMVAIYNANLEKVLAELPSPVTGGTMLTVEDFQQELKCNINIKHREEFDEEKEPDGMVLSGWTQPVAAAENEDKSVSNGANTSDAPITEVEKSENDDDVGIISPVKKRKLPDDSDKSNTADDERHHKKLQVIDDEDDLVMLDGNLDGFKKRRVS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1171 635 Gene3D - 432 584 - -
Mtr8g1171 635 MobiDBLite consensus disorder prediction 570 610 - -
Mtr8g1171 635 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 159 370 IPR023318 -
Mtr8g1171 635 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 4 551 - -
Mtr8g1171 635 MobiDBLite consensus disorder prediction 551 569 - -
Mtr8g1171 635 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 5 478 IPR035985 GO:0008641
Mtr8g1171 635 PIRSF SUMO_E1B 2 616 IPR030661 GO:0016925|GO:0019948
Mtr8g1171 635 CDD Uba2_SUMO 10 431 - -
Mtr8g1171 635 Pfam Ubiquitin-activating enzyme, SCCH domain 317 365 IPR019572 -
Mtr8g1171 635 Gene3D - 2 104 IPR042449 -
Mtr8g1171 635 Pfam ThiF family 6 429 IPR000594 -
Mtr8g1171 635 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 4 551 IPR045886 -
Mtr8g1171 635 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Mtr8g1171 635 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 438 529 IPR028077 -
Mtr8g1171 635 MobiDBLite consensus disorder prediction 550 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1171 Mtr-Chr8 14317924 14324527 Dispersed