Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1152 ATGAACCATTCTTGTTCCAACAACACGAATGCAGAGTTGAAAATGTCTCTCTTCGTTTTCTTTAAAGATGCAAGACTTGTCTTCAAGCTAGATGCACTATCTCGGGAGATATTAGGGATTGCATTACCCTCAGCATTAGCTGTTGCTGCTGATCCTCTTGCTTCTCTTATTGATACTGCTTTCATAGGCCACTTGGGACCGGTGGAACTTGCTGCAGCAGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATATTTCCTCTTGTTAGTATTACAACTTCCTTTGTAGCTGAGGAAGATACTATTGAAAGAATGAATATCAAAGCATCCAAAAATATTGATGATGCTAAGTTAAGTGGAATCGAAACCCCTAAGAATCAGTTACTTCAAGACATAGAAAATGGAAAGATACACAAAGAGAATATTGATGTTGAAAAATATGCTGCCAACAATGACACAAATGTTGAAGATGGTACAAACAAGAGTAAAGACAAAGATGGAAAAAAGAAGAGACACATTGCTTCAGCATCAACAGCACTCCTTTTCGGCACAATGCTTGGCCTAATTCAAACTACAATACTTATATTTGGAGCTAAACTTCTATTAGCTGCCATGGGTATAAAACATGATTCTCCTATGCTAAAACCAGCAGTGAAATACTTAAGATTGAGAGCATTTGGTTCTCCTGCCGTTCTTCTCTCATTGGCAATGCAAGGAATCTTTAGAGGGTTCAAAGATGTAACAACTCCTTTATATGTCATACTTTCGGGATACGCATTGAATGTCATATTGGATCCAATACTCATCTTTTATTTGAAATTGGGACTCAATGGTGCAGCCATTTCACATGTTTTCTCCCAATACTTGATGGCATTCACCCTCTTAGTTTTATTAATGAGAAAAGTGTATATCCTACCTCCAAGCCTTAAGGATTTGCAGATATTCCGGTTTCTTAAAAATGGTGGTTTATTGTTGGCAAGAGTAGTAGCAGTGACATTCTGTATGACCTTTGCAGCATCATTGGCAGCAAGGTTAGGTTCTGTTCCTATGGCTGCATTTCAACCTTGCTTACAAATCTGGTTGACATCATCACTTCTTGCTGATGGTTTGGCTGTTGCTGTTCAGGCAATACTAGCATGTTCCTTTACTGAAAAGGACTATAAAAAGACTACAGCTGCAGCAACAAGAGCACTCCAAATGAGTTTTGTATTAGGAATGGGACTCTCTATACTTGTTGGAATTGGATTTTACTTTGGAGCTGGAATTTTCTCAAAAGATGTTCATGTTGTTCATCTAATCAAAATTGGCATCCCGTTTGTTGCTGCAACACAACCAATCAATTCATTAGCCTTTGTATTTGATGGTGTGAATTATGGATCTTCTGATTTTGCATATTCTGCTTACTCCTTAGTCATGGTGTCGGTTGTAAGCATTGTTACAGAATTCTTTCTCTATAGGAGCAAACAATTCATCGGTATATGGATTGCACTAACCATCTATATGATTCTTCGCATGTTTGCTGGTATATGGAGGATGGGAACAGCAACTGGACCTTGGAGATATCTCAGAACCAGCTCATTGCCATAG 1596 0.3847 MNHSCSNNTNAELKMSLFVFFKDARLVFKLDALSREILGIALPSALAVAADPLASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTIERMNIKASKNIDDAKLSGIETPKNQLLQDIENGKIHKENIDVEKYAANNDTNVEDGTNKSKDKDGKKKRHIASASTALLFGTMLGLIQTTILIFGAKLLLAAMGIKHDSPMLKPAVKYLRLRAFGSPAVLLSLAMQGIFRGFKDVTTPLYVILSGYALNVILDPILIFYLKLGLNGAAISHVFSQYLMAFTLLVLLMRKVYILPPSLKDLQIFRFLKNGGLLLARVVAVTFCMTFAASLAARLGSVPMAAFQPCLQIWLTSSLLADGLAVAVQAILACSFTEKDYKKTTAAATRALQMSFVLGMGLSILVGIGFYFGAGIFSKDVHVVHLIKIGIPFVAATQPINSLAFVFDGVNYGSSDFAYSAYSLVMVSVVSIVTEFFLYRSKQFIGIWIALTIYMILRMFAGIWRMGTATGPWRYLRTSSLP* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1152 531 PANTHER PROTEIN DETOXIFICATION 10 531 - -
Mtr8g1152 531 Pfam MatE 331 484 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g1152 531 Pfam MatE 173 270 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g1152 531 MobiDBLite consensus disorder prediction 151 173 - -
Mtr8g1152 531 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 10 531 IPR044644 -
Mtr8g1152 531 TIGRFAM matE: MATE efflux family protein 43 497 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g1152 531 CDD MATE_DinF_like 35 517 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1152 Mtr-Chr8 14102563 14109208 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1152 8 14102563 14109208 Mtr8g1152 8 14102563 14109208 ECH
Mtr8g1152 8 14102563 14109208 Mtr3g0692 3 9811410 9820038 PCT