Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0568 ATGGATTTGAGTGTGAATGAGGAAGAGGTAGAGTCAGAGGAAGAGATTCATGTTCCAGCTGAAATTGATTGGCAAATGCTTGATAAATCCAAGTTTTTCTTCCTCGGTGCTGCTTTGTTTTCTGGTGTTTCAGCAACATTGTATCCTGTTGTTGTGTTGAAAACTAGGCAGCAAGTTGCCCAATCACAAGTTTCTTGTATTAAGACTGCCTTTTCGTTGATTAAGGGGGAGGGGTTTAGAGCGTTGTATCGTGGGTTTGGTACTTCGTTGATGGGTACAATCCCGGCTAGGGCTTTGTATATGGCGGCGCTTGAGGTTACTAAGAGTAATGTAGGGACTGCTACTGTTGGTTTTGGTCTTGCTGAACCGACGGCTGCTGCAATTGCTAATGCGGTTGCTGGTTTGACTGCGGCTTTAGCAGCTCAGCTTGTGTGGACGCCGATTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTAGTTGTAATTCAAGTGATCCTAAGGGTTCGTCTGTAAGATATGTTAATGGTATTGATGCTTTTAGGAAAATTGTGAGAACGGATGGTCCTAGGGGTTTGTATAGAGGTTTTGGGATATCGGTTTTGACGTATGCGCCTTCAAATGCAGTATGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGATATTACTTGACTAACAAGAAAGGTGGGGAGGGAAGTGACAACAACAATGGAGGGGCTAATGTCTTGAGGCCGGATACAAAAACTGTTATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGAGGCATGTCTGCTTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTGCAGGTCTTAGATGGCGATGAGAATGGCCGTCGTGGACCAACAGTGATGCAGACAGTTAGAAGTTTGGTTAAGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCGTTCTCTGCAACAACAATGATCACAACCTATGAGCTTTTAAAACGGCTTTCCGCAAAGAATCAAGAGGTTTTAACATGA 1059 0.4476 MDLSVNEEEVESEEEIHVPAEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGFGLAEPTAAAIANAVAGLTAALAAQLVWTPIDVVSQRLMVQGSCNSSDPKGSSVRYVNGIDAFRKIVRTDGPRGLYRGFGISVLTYAPSNAVWWASYSVAQRMVWGGVGYYLTNKKGGEGSDNNNGGANVLRPDTKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSFSATTMITTYELLKRLSAKNQEVLT* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0568 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Mtr8g0568 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 254 343 IPR018108 -
Mtr8g0568 352 SUPERFAMILY Mitochondrial carrier 25 340 IPR023395 -
Mtr8g0568 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Mtr8g0568 352 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Mtr8g0568 352 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Mtr8g0568 352 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Mtr8g0568 352 PRINTS Mitochondrial carrier protein signature 263 285 IPR002067 GO:0055085
Mtr8g0568 352 Pfam Mitochondrial carrier protein 258 347 IPR018108 -
Mtr8g0568 352 Pfam Mitochondrial carrier protein 127 221 IPR018108 -
Mtr8g0568 352 Pfam Mitochondrial carrier protein 39 110 IPR018108 -
Mtr8g0568 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 5 349 - -
Mtr8g0568 352 Gene3D Mitochondrial carrier domain 32 350 IPR023395 -
Mtr8g0568 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 5 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0568 Mtr-Chr8 6807055 6808917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0568 1 349 Chloroplast and Mitochondria Gene Families AT1G72820 73.011 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0568 K15121 - gmx:100789089 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0568 8 6807055 6808917 Mtr8g0568 8 6807055 6808917 ECH