Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0447 ATGCAAGACCAAACAACATTTCAACCCATGAAACCAAATTTTCCAGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAACAACACAAAATTCTGCTACTACAACAACTACAATCTCTCACAACCACGCCATTTTTGCAAAAACTGTAAAAGATATTGGACAAAAGGTGGTGCTTTGAGGAACATACCAGTTGGTGGTGGAACAAGAAAAGTCACAAAACGTTCATCAAATTCCAAACGTTCAACAACACCATCTTCTTCTTCTCCATCAGCATCAACAACCAGTTCTTCAGCAGCAAAAGTTTCGGCTTCAGTTTCAGAAACTGACCCGACCCAGATTCATGTTGACCCGGCTGAGAGAAATTTCAGTGGAGGGAGTTTTAGTTCACTTCTTGCATCAACTGAGCGATTTGGAAACCTTTTTGAAGGTCTGAATTCAAATGGGTCGGGTTTAAAAATGGTGGAAATGGGTGAATTTGGTGAGAATTTGAACTGTGACCCGGTTGTGAATACGGATTTGGGTCAAAACCAGGGTGGTAGAAATGGTGAATCAGAGATCTTTCTTGGTTTGCAAAATGGTGGTTCAAACTGTTGGAATGATAATCATGGTTGGTCTGATCTTGCTATATACACCCCTAGCTCAACTTATCAGTAG 657 0.4049 MQDQTTFQPMKPNFPEQEQLKCPRCESNNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGTRKVTKRSSNSKRSTTPSSSSPSASTTSSSAAKVSASVSETDPTQIHVDPAERNFSGGSFSSLLASTERFGNLFEGLNSNGSGLKMVEMGEFGENLNCDPVVNTDLGQNQGGRNGESEIFLGLQNGGSNCWNDNHGWSDLAIYTPSSTYQ* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0447 218 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 3 218 - -
Mtr8g0447 218 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Mtr8g0447 218 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 218 IPR045174 GO:0003700|GO:0006355
Mtr8g0447 218 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Mtr8g0447 218 MobiDBLite consensus disorder prediction 78 112 - -
Mtr8g0447 218 MobiDBLite consensus disorder prediction 61 121 - -
Mtr8g0447 218 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0447 Mtr-Chr8 5188622 5190454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0447 5 142 C2C2-Dof Transcription Factor Family AT1G51700 56.028 2.45e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr8g0447 zf-Dof 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0447 - - qsu:112018035 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0447 8 5188622 5190454 Mtr8g0447 8 5188622 5190454 ECH