Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2410 ATGAACATGTCTGAGACTCAGAAGGATCATGGTATTATGCTATTTGGTTGGAAGATTCCGGTGCCAGAATGTCGAATTCCGCCCAATTCTGGACCCATGGATACTTGCAGCAGTACAAGGAAAACAGAAGCGGAAATACCTTGTGCAGAAAAAACTGAGCAACAAGACAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCTATACAGGAAAAGGAGCCAATAGTAAATTCCAAGCCCACTGAAGATAACACGGAGACTACAGATCAAGATAAACTCTTAAAGAAACCAGACAAGATTGTTCAGTGTCCGCGATGCAACAGTTGGGACACCAAGTTTTGTTATTTCAACAACTATAATGTCAATCAACCTCGACATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGAACAATGAGAAATGTTCCGATAGGTGCTGGGAGGCGGAAGAATAAGCACCTAGCCTCTCAATACCGGCAAATTATAGTAACCACGAATGGAATTCCAACCACGAGGCTAGAAAGTACTAACTCATCCGATCACCACCACACATCTACGGATAACGAGACTGTATTGAAATTTGGTCCTGATACCCCTCTTTGCGAATCAATGGAATCAATGCTTCATCTTAGAGACCAGAAAAGAAATGCTGATGCAAATTCAAACAGTTCTGTGCAACATAGAGAGGATCCGTCCTTGTGTGGATCTTCTGTAACGAATACCGGAAATCAAGGAAATGAAGTATCAGAACACAATGCTTCAAATTGGTTGCAGTGTTATCCTGTTTCTCCATGGGTACTACCGATGAATCCAGGTTGGAATAATGTTGCTTCGATGGCAGCAGTTCATCCGACTTCTGCATCCATGCAATGGTGTCCGACGCCTATGTTGGCAATTCCAGGAATTCGGCCACAAAATATACCTTTACAACTTGTAGCAGCATCACATTGGAGTGGACCGTCACTTTGCCTCTCGCCGCCTTCATCTACTAGTAACAGTTGCTGCTCAGGAAATGGCTCACCAACCCTAGGAAAGCACAGTAGAGATACAGTTTTCGTAGATGAAGACAAAACAGACAAGTGTGTTCCGGTTCGAAAAACGATTAGAACTGATGTCACAGATGCGGTCTCGAAAAGTCCTATCCGGGCTACATTAGCTACCAAGAAGCCTAATGAAGAAGGAAAAGACGGTGTATTGGGTGGCTCTCAGATTTTGGAAGCCAGCTCAGGAGCTATTTCTCATGCTCATACAATCCAGGAAAGCATATAA 1275 0.4329 MNMSETQKDHGIMLFGWKIPVPECRIPPNSGPMDTCSSTRKTEAEIPCAEKTEQQDNSSDSMDSKQESIQEKEPIVNSKPTEDNTETTDQDKLLKKPDKIVQCPRCNSWDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRQIIVTTNGIPTTRLESTNSSDHHHTSTDNETVLKFGPDTPLCESMESMLHLRDQKRNADANSNSSVQHREDPSLCGSSVTNTGNQGNEVSEHNASNWLQCYPVSPWVLPMNPGWNNVASMAAVHPTSASMQWCPTPMLAIPGIRPQNIPLQLVAASHWSGPSLCLSPPSSTSNSCCSGNGSPTLGKHSRDTVFVDEDKTDKCVPVRKTIRTDVTDAVSKSPIRATLATKKPNEEGKDGVLGGSQILEASSGAISHAHTIQESI* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2410 424 MobiDBLite consensus disorder prediction 219 245 - -
Mtr7g2410 424 MobiDBLite consensus disorder prediction 172 194 - -
Mtr7g2410 424 Pfam Dof domain, zinc finger 98 155 IPR003851 GO:0003677|GO:0006355
Mtr7g2410 424 MobiDBLite consensus disorder prediction 44 93 - -
Mtr7g2410 424 PANTHER CYCLIC DOF FACTOR 2 3 422 IPR045174 GO:0003700|GO:0006355
Mtr7g2410 424 MobiDBLite consensus disorder prediction 214 245 - -
Mtr7g2410 424 PANTHER CYCLIC DOF FACTOR 3-LIKE 3 422 - -
Mtr7g2410 424 MobiDBLite consensus disorder prediction 26 93 - -
Mtr7g2410 424 ProSitePatterns Zinc finger Dof-type signature. 103 139 IPR003851 GO:0003677|GO:0006355
Mtr7g2410 424 ProSiteProfiles Zinc finger Dof-type profile. 101 155 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2410 Mtr-Chr7 40514557 40517433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2410 3 424 C2C2-Dof Transcription Factor Family AT3G47500 32.919 3.16e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr7g2410 zf-Dof 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2410 - - cam:101500722 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2410 7 40514557 40517433 Mtr7g2410 7 40514557 40517433 ECH