Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1358 ATGGTTTATACTTCTCTCCCACCATATATGGATCCAGCCAATTGGCATCAACAGCAACCAAATCATCAAGTTGCCAACACTAGTGTTAACACTCCTCTACTTATTCCACCACCACAGCCTCCACCATCGAACCTGACACCATCGCAACCTCATGGAGGCTCGATCAGGCCAGGTTCGATGGCAGATAGGGCAAGGATGGCAAACATACCTATGCAAGAGCCTTTACAAAAATGTCCAAGGTGTGATTCCACCAACACAAAGTTTTGCTACTTCAACAACTACAGTCTCTCGCAGCCGCGACACTTCTGCAAGGCTTGTCGAAGGTATTGGACAAAGGGTGGTGCCCTTAGAAGTGTCCCGGTTGGCGGTGGTTGCCGAAGAAACAAAAGGTCTAAATCAAGCAGCAACAACACCTCCAAGTCGCCGGCTAGCTCAGACCGCCAAACTAGCTCTACAAACAACTCTCCTGCCGTACTCAGTTCCCCAACGCCACCACCGATGAGATTCATGGCTCCTTTGCATCATCTTGGAGATCACCTCAGTGAAATAGGACTAAACTATGGTTTTTCTGGTCCAATGGGAGGTGTTGGAGACTTAAATTTCCATATCGGAAGCTCTTTAGGTGGAGGCGTTGGTAACGGTGGTGGTTCCGCTTCGATTTTACCTGTTAGTAATTTTGAGCAATGGAGGATGCCACAAACTCATCAATTTCCCTTCTTGTCAACTTTAGAAGCTTCTTCTTCACATGGATTGTTGTATCCATTTGAAGGTGGTGGTAACGGTGGTGGTGCTAATGATCAAGGCCATGCATATGGTGGTGTGTCTAAGGTATTATCAAATAATTCTAGTGTGAAAATGGAAGAGAATCAATCTAGACAATTCTTGGGAATGATCAACAACAACAACAACAACAACAATAATAATCCTAATAGTGAACAATTTTGGAGTTCTTCTGCTGGTGGTGGTGCTAATAATTCACCTTGGACAGATCTTTCTACAGCTTATAACTCTTCTTCAGCTACTACAAATTCCAACTATAGGACATAG 1047 0.4451 MVYTSLPPYMDPANWHQQQPNHQVANTSVNTPLLIPPPQPPPSNLTPSQPHGGSIRPGSMADRARMANIPMQEPLQKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTKGGALRSVPVGGGCRRNKRSKSSSNNTSKSPASSDRQTSSTNNSPAVLSSPTPPPMRFMAPLHHLGDHLSEIGLNYGFSGPMGGVGDLNFHIGSSLGGGVGNGGGSASILPVSNFEQWRMPQTHQFPFLSTLEASSSHGLLYPFEGGGNGGGANDQGHAYGGVSKVLSNNSSVKMEENQSRQFLGMINNNNNNNNNNPNSEQFWSSSAGGGANNSPWTDLSTAYNSSSATTNSNYRT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1358 348 Pfam Dof domain, zinc finger 75 130 IPR003851 GO:0003677|GO:0006355
Mtr7g1358 348 MobiDBLite consensus disorder prediction 28 59 - -
Mtr7g1358 348 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 8 341 - -
Mtr7g1358 348 MobiDBLite consensus disorder prediction 33 47 - -
Mtr7g1358 348 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Mtr7g1358 348 MobiDBLite consensus disorder prediction 120 168 - -
Mtr7g1358 348 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Mtr7g1358 348 MobiDBLite consensus disorder prediction 128 158 - -
Mtr7g1358 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 341 IPR045174 GO:0003700|GO:0006355
Mtr7g1358 348 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1358 Mtr-Chr7 27988698 27990505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1358 1 236 C2C2-Dof Transcription Factor Family AT2G37590 42.279 3.45e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr7g1358 zf-Dof 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1358 - - gmx:100796820 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1358 7 27988698 27990505 Mtr7g1358 7 27988698 27990505 ECH