Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1298 ATGTCTCTTTGCTCAAACCCTAATATTCAAAACCCATTACCTATGAACAATTCAATCCTTCAAAATACGAATTTTTCCTATGAAAATTCTGATTTTGCTGAGATTCAAAGCACAGTAGTTCCAACAAGTCATGTCCCAGACAAGAAGATGATGTATGAGTTGGAGAAAAAGCTTCATGAAGACATTGATGATGAAGAAGAATGGTCACTAGTTGTTTCTGGGATTATGAACACCAACAACGAATGGTCAGAAACAATTCGTAATTTGAATAGTTTTGAGCACAATCCTATCCAAAAACCTATTTCATTCTCACCTCCTTTTTCCACCACGTCACTAAATTCATCTCCTTCATCTATTGTTTCACCAGCTTCTGAGTTTTCCAAACAATCATTAATGGAAGCTGCCACTGCAATTTCTGAAGGCAAAATGGATTATGCTAAGGAGATCCTCTCTAGTTTCTCACATACACAAAACCCAAAACTAAAATTTGACAGTTGGTTATTGGATTGCATTGCTTCAGCGCTGAAATCGCGTGTGAATAACATTGAAAATCCACCTCCAGTTGCAGAATTGTTCAGCAAAGAACACACTGATTCAACTCAGCTTCTGTTTGATAACTCTCTTTGTTTCAAGCTCTCTTTCATGGCTGCCAATATTGCAATCCTGGAAGCTGCATTCAAAGATACAACAAAGAGCGTGAAGAATCTTTGTGTTGTGGATTTTGATATCGGTAATGGAAAACAATATATCAATCTTCTCCAAGAGCTCCATGCACGTCTCAACGGATCACCAGCAATGTTGAAGATCACGACTGTGACAGTGAACATTGACAACGAGAACCTGAAAACCATCGGAGAACTTTTGGTTCGAGAAGCTAAGAGTTTAGGAATCGGGTTTGAATTCAAACCGGTGAACCTAAAACTCACAGAATTAACTCGGGAGTCATTGAACTGCAACTCAGAGGATATTCTTGCTGTGAATTTTGCGTTCAACCTATGCAAAATACCAGACGAGAGCGTGTCAACGGAGAATCCACGTGACACACTTCTTCGTCAAGTGAAATCACTCTCTCCAAGCATTGTAACTATTTTGGAGCAAGAACTGAATACAAACACAGCACTGTTTGTTTCACGTGTGGCTGAAACTCTTTCTTACTACAACACATTGCTAGAATCTATTGAATTCGCGATGGATCGTGGGAGTTATAAGCGATTAAAGCTTGAAAAAGGATTGAGCAGGAAGATGAGAAATGTAGTTGCTTGTGAAGGGAGGGATCGTGTTGAAAGGTGTGAAGTTTTTGGGAAGTGGCGTGCACGCATGAGCATGGCTGGGTTTAGGTTAAACCCGATGAGTCGGAAAGTTACTGAGTCAATAACTTCAAGACTCATTCAAGGTAGTAGAATTACTGTGCATGAAGAGAATGGTGGAGTTTGCTTTGGTTGGAAGGGAAAAGCTCTCACTGTTGCATCTTCTTGGTGTTAA 1482 0.3981 MSLCSNPNIQNPLPMNNSILQNTNFSYENSDFAEIQSTVVPTSHVPDKKMMYELEKKLHEDIDDEEEWSLVVSGIMNTNNEWSETIRNLNSFEHNPIQKPISFSPPFSTTSLNSSPSSIVSPASEFSKQSLMEAATAISEGKMDYAKEILSSFSHTQNPKLKFDSWLLDCIASALKSRVNNIENPPPVAELFSKEHTDSTQLLFDNSLCFKLSFMAANIAILEAAFKDTTKSVKNLCVVDFDIGNGKQYINLLQELHARLNGSPAMLKITTVTVNIDNENLKTIGELLVREAKSLGIGFEFKPVNLKLTELTRESLNCNSEDILAVNFAFNLCKIPDESVSTENPRDTLLRQVKSLSPSIVTILEQELNTNTALFVSRVAETLSYYNTLLESIEFAMDRGSYKRLKLEKGLSRKMRNVVACEGRDRVERCEVFGKWRARMSMAGFRLNPMSRKVTESITSRLIQGSRITVHEENGGVCFGWKGKALTVASSWC* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1298 493 PANTHER SCARECROW-LIKE PROTEIN 8 44 493 IPR030013 -
Mtr7g1298 493 Pfam GRAS domain family 128 492 IPR005202 -
Mtr7g1298 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 493 IPR005202 -
Mtr7g1298 493 ProSiteProfiles GRAS family profile. 118 493 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1298 Mtr-Chr7 27021340 27022821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1298 127 492 GRAS Transcription Factor Family AT5G52510 50.909 3.56e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr7g1298 GRAS 4.6e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1298 - - aip:107644872 471.085