Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0561 ATGGTCTTCCCCTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAAGCAGGAATTGGTATCGGCGATCAAAATCCATCAGCTTTGCAGCCGCTATCAGCTTCAATGATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCGGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAAAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGCTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAAAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAATAAAAGAAGAAAAGGAAATTCAGTATCAAAATCACCTCTAAAACCTAATCATAATGATCATCTCCAGATCGGTACCGGTGCTGCTGCTGGTGGTTCTAGCTCAGCAAGTGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATATTGGAATGCCTAATTTTCCAACACAATTTCCATTCGTAACCTCTTTACATCGTCATAACGACAATAGTTACGCTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACTACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATATCAAATGGCATTGGTGAACAATGGAGGTTTCCAAATTCGCTACAAATTCATCAGCAGCAACAATATCAACAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGACTATTTCAATTTGGTGGAGAGAACAATGGTGAACCACAAAGAAATTTGTTTCGTTCTAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAGTGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCACTCCACCACCTTGTGATCCTCAAATCTAG 1122 0.393 MVFPSLPIYLDPPNWSQQQAGIGIGDQNPSALQPLSASMMSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNNKRRKGNSVSKSPLKPNHNDHLQIGTGAAAGGSSSASANSSSNNGCTNSNVNIGMPNFPTQFPFVTSLHRHNDNSYASEGIGSLLAKNMSNSTTTNVEFQLGSGSSSIGNGNGGSLLISNGIGEQWRFPNSLQIHQQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLSGSGNSNDLFWNGNGNENAWNEVPSFTPPPCDPQI* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0561 373 MobiDBLite consensus disorder prediction 121 173 - -
Mtr7g0561 373 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Mtr7g0561 373 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 365 IPR045174 GO:0003700|GO:0006355
Mtr7g0561 373 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 40 365 - -
Mtr7g0561 373 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Mtr7g0561 373 MobiDBLite consensus disorder prediction 157 173 - -
Mtr7g0561 373 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0561 Mtr-Chr7 8555619 8557455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0561 1 133 C2C2-Dof Transcription Factor Family AT2G37590 48.299 1.61e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr7g0561 zf-Dof 9.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0561 - - cam:101502096 455.677