Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0183 ATGTTTATGTGGCTCAAATTCATCTTCACTTCTGATGTGGCACTTCAAACCTTTCTCAACGGATCAACACTTTCTCACTCTTTCACAACGTGTCACTTTTCTTTTCTCTCTCTCTACAACAACCTTTTACAACATCTTTTTTTCTCTTTCTACTACAACAACAGAAAAAGTTTTCATCTGTTTTTAGCAACAAAAATGTTGGAAACAAAAGACTCTGCGATCAAACTGTTTGGAAAAACAATTCCAATTTTGGAGGTTCGTGTTGGAGATGTTGTTGTTGAGAGTATTGATGATGATCATCATCATTTTTCTACAAACTCTTCAAATGAGTCTCGGAATAATAAGGATGAACAAGACCAAGAGATTGAGAAGAACACATTGGGAGAAAAACCATCGGATGAAAAGAATGAAGATGGAATCCCTATACAATCAACAGAGGAATTCACCAATCCAGATGCAGCCTCTAGAACTGATGAAGAATCTATTACTGTATCCACTGAAAGGAAGGCTGCTACATTGAAAACCTCAAAGACCGAAGAAGAACAGGACGAGACGAGTAATTCACAAGATAAGATCCTCAAAAAACCGGACAAAATAGTTCCTTGTCCTCGCTGTAATAGCATGGACACGAAGTTCTGCTACTATAATAATTACAATGTCAACCAACCCCGTCATTTCTGCAAGAACTGCCAGAGATATTGGACTGCCGGTGGAACCATGAGAAACGTACCGGTAGGTGCCGGTCGTAGAAAAAACAAGAGCTCTTCTTCTCACTATCGCCAGATAACTGTCTCAGAAGCGACACTCCAGAATTCTCGGATACACCCTTCCGTGAAATGCAACGGTACAATCCTTACATTTGGATCTAATTCACCTGTATGTGAATCAATGGCATCTGTTTTGAAACATGCTGATAAAACAATGCAAAATTACACAAGAAATGGATATCATAAACATGAAGAACTAAGAATTTGTGTTCCTCATACCAGTGAAGAACAAGGCGAGGATCAGTCAAATAAATCGTCAGTTACCTCCACAAAGTCGACGGAAGGTGCAACCACCAATGTATCTCAAGAACAAGCTATGTGGAATGACCATAGCTTCCCACCACAAGGTGGCTACTTTCCTCATGGAACTCCTTGGCATTTACCATGGAATCCAGTGCAAATGAGCTCACCGATTCCACCTCCGGCCTTCTGTCCACCAGGATTTTCCATGCCATTCTATCCTGCAACAACTTATTGGGGTTGTACCATGCCAAGTGCATGGAACATTCCACGGCAAGCACAACCATCATCACCGAATGGTGCAAACCATGACTCTACTCCAAACTCTCCAACCTTAGGTAAACATTCAAGGGAGGACAACATGCTAAAATCAAGTGAAGGAGATGGTAAGAAAGAAATAAGCGAAGAAAAGAGCTTGTGGTTTCCTAAAACTTTGAGGATTGATGACTCTGAGGAAGCAGAAAAAAGCTCTTTCTGGACAACACTTGGGATTAAGAACAACAACGCCGACTCAGTTCCTCCGAGAAGACTCTTTCAGGCATTCCCTTCAAAGTGTGACGAGAAAAATCACTTGGTACAAGTGTCTTCAGTCTTGCAAGCCAATCCAGCGGCATTGTCTAGGTCGCTTCACTTTCACGAGACTTCGTAA 1656 0.4136 MFMWLKFIFTSDVALQTFLNGSTLSHSFTTCHFSFLSLYNNLLQHLFFSFYYNNRKSFHLFLATKMLETKDSAIKLFGKTIPILEVRVGDVVVESIDDDHHHFSTNSSNESRNNKDEQDQEIEKNTLGEKPSDEKNEDGIPIQSTEEFTNPDAASRTDEESITVSTERKAATLKTSKTEEEQDETSNSQDKILKKPDKIVPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRQITVSEATLQNSRIHPSVKCNGTILTFGSNSPVCESMASVLKHADKTMQNYTRNGYHKHEELRICVPHTSEEQGEDQSNKSSVTSTKSTEGATTNVSQEQAMWNDHSFPPQGGYFPHGTPWHLPWNPVQMSSPIPPPAFCPPGFSMPFYPATTYWGCTMPSAWNIPRQAQPSSPNGANHDSTPNSPTLGKHSREDNMLKSSEGDGKKEISEEKSLWFPKTLRIDDSEEAEKSSFWTTLGIKNNNADSVPPRRLFQAFPSKCDEKNHLVQVSSVLQANPAALSRSLHFHETS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0183 551 MobiDBLite consensus disorder prediction 100 192 - -
Mtr7g0183 551 Pfam Dof domain, zinc finger 198 254 IPR003851 GO:0003677|GO:0006355
Mtr7g0183 551 MobiDBLite consensus disorder prediction 329 355 - -
Mtr7g0183 551 MobiDBLite consensus disorder prediction 100 141 - -
Mtr7g0183 551 PANTHER CYCLIC DOF FACTOR 2 66 550 IPR045174 GO:0003700|GO:0006355
Mtr7g0183 551 MobiDBLite consensus disorder prediction 336 355 - -
Mtr7g0183 551 ProSitePatterns Zinc finger Dof-type signature. 202 238 IPR003851 GO:0003677|GO:0006355
Mtr7g0183 551 MobiDBLite consensus disorder prediction 426 471 - -
Mtr7g0183 551 MobiDBLite consensus disorder prediction 172 192 - -
Mtr7g0183 551 MobiDBLite consensus disorder prediction 426 451 - -
Mtr7g0183 551 MobiDBLite consensus disorder prediction 142 171 - -
Mtr7g0183 551 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 66 550 - -
Mtr7g0183 551 MobiDBLite consensus disorder prediction 452 471 - -
Mtr7g0183 551 ProSiteProfiles Zinc finger Dof-type profile. 200 254 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0183 Mtr-Chr7 3056679 3060328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0183 71 551 C2C2-Dof Transcription Factor Family AT5G39660 42.330 9.66e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr7g0183 zf-Dof 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0183 - - gmx:100784308 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0183 7 3056679 3060328 Mtr3g0908 3 13416096 13419006 ECH
Mtr7g0183 7 3056679 3060328 Mtr7g0183 7 3056679 3060328 ECH
Mtr7g0183 7 3056679 3060328 Mtr6g0304 6 3712951 3716429 ECH
Mtr5g1652 5 18117140 18119144 Mtr7g0183 7 3056679 3060328 ECH