Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0063 ATGGCTTCATCAAGGAATCCTTTGCCTACCCTAACATCACCGCCACCTTCACTCTCTTTCGGCAATTCACTACACGAGCCGCCTCTGCCCACCCTTCCATTTGACGTCATTCCAGAAATCCTTTGCTTTCTACCTGTGAAGTTCCTACTCCGGTCTCGATGCGTTTGCAAATCCTGGAACTCTCTCGTATCTGATCCCAAGTTTGCCAAGAAACACTTTTGCATGTCAGCTGCTCGCCATATTTACTTCATAAGCTACAAGAGATCTGATACCGAGTACAGTTTCAGATCTTACCCTCTCAACTCCGTTTTCACAAAAAGAGCCACTCCACAAGATAAGTTTGAGTATTTTCCTAACAATTTTCGTGGAAAACGTCGTATAATGCATTCATATGGCTTCGTTGGCTCTTGCAATGGCATCCTTTGTATTGCAGATGACAATGACAAAGGCTTAGTTATATTGTTGAACCCTTCCATTAGAAAATTCAAGGAGTTGCCCCTTCTTGAAACACCGCCAAGTGCAATGTTTGGTAACTTTGAGACGACGCTTGGCTTTGGCTACGATTCTTTTACCGAGAATTACAAGGTGGTTGTTGTTATGCGGTACAAGATGCGTGTCGGTAGTCATTACCGTGATTATGTTTACAAAACTGAAGTGAAGATTCATACATTGGGTACCAATTCTTGGAAAAGCATTCAAGAGTTTCCTTTTGGTGTTGTCCCAATTGGACAATCTGGAAAATTTCTGAGTGGCACGATTAATTGGTTGACCTCTATTGATCTCCAACGAGAAAGTCCTCGCTTTATTGTTTCTTTTGATTTGGGAAAAGAATCTTATCAAAAGGTTTTGCCTCCTGATTATGGAGGGGTAGATGTGTGTCACTTCTTAGCCTTGGGTGTGTTGAGGGATTGCTTGTGCCTGGCTTCTCGTGATGATACCTACTCTGTAAAGGATGTTTGGGTTATGAAGGAGTATGGAAATAGAGAGTCGTGGACTAAATTGTTCAATGTTTCTTACAGGGGAGATCCTAAATATAGTGTATTTGGTGAGCCAATATATATTTTTGAGGATAATCAAGTGCTGCTGAAGTTTCCAAGGTATTTAAATTTGAAGTTGATTGATTCAAGGAATGGTACTTTTACATCTACTGGATTTAATAACACCCCAGAAATCTGCAATGAGAGTTTAATATCACCATGTTCTTAA 1206 0.4071 MASSRNPLPTLTSPPPSLSFGNSLHEPPLPTLPFDVIPEILCFLPVKFLLRSRCVCKSWNSLVSDPKFAKKHFCMSAARHIYFISYKRSDTEYSFRSYPLNSVFTKRATPQDKFEYFPNNFRGKRRIMHSYGFVGSCNGILCIADDNDKGLVILLNPSIRKFKELPLLETPPSAMFGNFETTLGFGYDSFTENYKVVVVMRYKMRVGSHYRDYVYKTEVKIHTLGTNSWKSIQEFPFGVVPIGQSGKFLSGTINWLTSIDLQRESPRFIVSFDLGKESYQKVLPPDYGGVDVCHFLALGVLRDCLCLASRDDTYSVKDVWVMKEYGNRESWTKLFNVSYRGDPKYSVFGEPIYIFEDNQVLLKFPRYLNLKLIDSRNGTFTSTGFNNTPEICNESLISPCS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0063 401 Gene3D - 19 115 - -
Mtr7g0063 401 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 363 IPR017451 -
Mtr7g0063 401 ProSiteProfiles F-box domain profile. 26 72 IPR001810 GO:0005515
Mtr7g0063 401 Pfam F-box domain 32 68 IPR001810 GO:0005515
Mtr7g0063 401 PANTHER PROTEIN, PUTATIVE-RELATED 29 384 - -
Mtr7g0063 401 PANTHER OS02G0783600 PROTEIN 29 384 - -
Mtr7g0063 401 Pfam F-box associated 249 364 IPR006527 -
Mtr7g0063 401 SUPERFAMILY F-box domain 24 97 IPR036047 GO:0005515
Mtr7g0063 401 SMART fbox_2 32 72 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0063 Mtr-Chr7 1207400 1208605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0063 215 335 Carbohydrate Esterase AT1G25141 28.682 1.38e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0063 - - sly:101257551 377.481