Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2207 ATGGCTTCCAAAAAAGCACTTCTATACTTCAACTTATCACTTCTCATTACAACAATCTCTCTTCTTCCATTTCCAACTTCCTCATCTCGCATCATTACTTCACACACCTCCCTTCTTGATATCTCTTCCTCAATTCACCAAACCAAACAAGTCCTTAACTTTAACCCTAATAACATTAATCTTGTTGAAGAAACCCTAAACCAAAAACCCGTTTTTTCAAACTCTTCATCTTTCTCAATTCTCATACATCCAAGAGAGAATCTTCTCAATGAAAACCATAAAGACTATACAAAACTTATGCAAGCTAGACTCACTCGTGACTCAGCCCGAGTTGACTCACTAACTACAAAACTCGAACTTTCTCTAAACAACCTCAAGAAAACCGATCTCCACCCGGTTCAAACCGAGCTTCAACAAGAAGATCTCTCCACACCAGTTTCCTCCGGTTCTGGCTCCGGCTCCGGTGAGTATTTCTCCAGACTAGGCATAGGTCAACCACCAAAACCCTACTACATGGTTCTTGACACAGGTAGTGACGTTAACTGGATCCAATGCAAACCATGCACAGAATGTTACCAACAAACTGACCCAATATACGACCCAACTTCATCATCAACCTATCAACCCATGACCTGTGAAGCAGAACAATGTCAATCACTCGAACTTTCTGGTTGTCGTGATGGTAAATGTCAATACCAAGTTTCTTACGGTGATGGCTCATTCACTGTTGGAGAATATAGCACTGAAACAGTCTCTTTTGGAAACTCCGGGTCAGTGAACCGTGTTGCTATCGGTTGTGGCCACGATAACGAAGGTTTATTCGTTGGTGCAGCTGGTTTACTCGGACTTGGTGGTGGGTCGCAATCTTTAATTTCGCAGATCAAAGCTTCATCGTTTTCTTACTGTTTAGTTGACCGTGACTCGGGAAAATCGTCAACTCTTGAGTTTAACTCGGTTCAACCCGCTGATTCAGTACTTGCTCCGATGTTAAAGAATCAAAGAGTTAATACGTTTTATTATGTTCAGCTCACTGGTATTAGTGTTGGTGGGCAGATGGTTTCTGTTCCGGCGGCGGCGGGAGATGGTTCTGGAAGTGGTGGGATTATTGTTGACTCTGGAACCGCGATAACGCGGTTACAGAGTCAACTTTATAACTCGGTTCGCGACGAGTTTAAAAGAATGACTCAGAATTTACGTTCTGCTGATAATTTTGCTTTGTTTGATACTTGTTATGATTTGTCTAATTTACAAAGTGTTAGGGTTCCAACTGTGGCTTTTCATTTTGGTGAGAATAAGGTTTGGAGTTTGCCGGCGAAGAATTACTTGATTGCGGTGGATTCTGCCGGAAAGTTTTGCTTTGCTTTTGCTCCGACGAGTTCTTCTTTGTCTATTATTGGAAATGTTCAACAACAAGGGACTCGTGTTACTTTTAATCTTGCTAATAATTTAGTGGGATTCTCAAACGATAAGTGCTAG 1476 0.4167 MASKKALLYFNLSLLITTISLLPFPTSSSRIITSHTSLLDISSSIHQTKQVLNFNPNNINLVEETLNQKPVFSNSSSFSILIHPRENLLNENHKDYTKLMQARLTRDSARVDSLTTKLELSLNNLKKTDLHPVQTELQQEDLSTPVSSGSGSGSGEYFSRLGIGQPPKPYYMVLDTGSDVNWIQCKPCTECYQQTDPIYDPTSSSTYQPMTCEAEQCQSLELSGCRDGKCQYQVSYGDGSFTVGEYSTETVSFGNSGSVNRVAIGCGHDNEGLFVGAAGLLGLGGGSQSLISQIKASSFSYCLVDRDSGKSSTLEFNSVQPADSVLAPMLKNQRVNTFYYVQLTGISVGGQMVSVPAAAGDGSGSGGIIVDSGTAITRLQSQLYNSVRDEFKRMTQNLRSADNFALFDTCYDLSNLQSVRVPTVAFHFGENKVWSLPAKNYLIAVDSAGKFCFAFAPTSSSLSIIGNVQQQGTRVTFNLANNLVGFSNDKC* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2207 491 ProSiteProfiles Peptidase family A1 domain profile. 157 487 IPR033121 -
Mtr6g2207 491 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 19 491 - -
Mtr6g2207 491 Pfam Xylanase inhibitor N-terminal 157 316 IPR032861 -
Mtr6g2207 491 Gene3D Acid Proteases 322 491 IPR021109 -
Mtr6g2207 491 PANTHER ASPARTYL PROTEASES 19 491 IPR001461 GO:0004190|GO:0006508
Mtr6g2207 491 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 172 183 IPR001969 GO:0004190|GO:0006508
Mtr6g2207 491 Pfam Xylanase inhibitor C-terminal 339 487 IPR032799 -
Mtr6g2207 491 Gene3D Acid Proteases 131 316 IPR021109 -
Mtr6g2207 491 SUPERFAMILY Acid proteases 152 491 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2207 Mtr-Chr6 39431551 39433606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2207 133 491 Miscellaneous Gene Families AT1G77480 24.304 1.54e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3738 8 47858194 47859564 Mtr6g2207 6 39431551 39433606 ECH
Mtr6g2207 6 39431551 39433606 Mtr6g2207 6 39431551 39433606 ECH