Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2133 ATGGATCCACCGCTTATCTCCACCGCCGCAACCACCATTCCTCATAACATCATCCAACAAAACTATCCTGAATCGGTCGAGTCTTTATCATCGCCACCACCACAGCCACCACCACGATCACGCGTTAATGAAACAATGAACGACGATTCCTTCCCTAATGTCCCCGGAGGCAAGCTTCGGCTAATGTGCAGCTACGGAGGCCACATAATGCCGCGCCCTCATGATAAGTCTCTATGTTATGTAGGTGGTGACACCAGAATCGTGGTCGTGGATCGCAGTTCTTCTCTGAGAGACCTATGTTCGCGTCTTTCGAGAACAATTCTCAATGGAAGACCCTTTACTCTCAAGTACCAGCTTCCAAATGAAGACCTTGATAACCTCATTACAGTAACATCAGATGAAGATCTTGATAACATGATTGAAGAATATGATCGTATAGCATCGGCATCTTCTACAATGAAACCTTCATCATCAAGACTAAGAGTGTTTTTGTTCTTCACAAAACCAGATACCACACTTTCAATGGGATCACTTCTTGATGATGCAAAATCTGAGACATGGTTTGTTGATGCACTCAACAACTCAGGGATTCTCTCAAGAGGTGTGTCAGATTCAGCAGGAGATTCTTTTGTGAATCTTGATAGTGTTCCTGCTAGTGATTCAAGCAATAACTTGGAATCTCAAGTAGAATCATTGACTCTGCTTGAAAACAACAACAATAAGGTTAAGAATGTTCTTGATAATGTTAATGTTGTGAATTCAACACCTAATTCACCTATGCTAGAAAACAGTTTATCATCATCATCTTTGACTCCTTCAATGGAGAATTTGCCACCAATTCGTGTTCGTGTTGATGAAAATGCCGGTAGCAGGCTTCAACAAGAGAACAAAGTTGTAATGAAGCAAGATGGTGGGTTTGTTGTTTCTTCTGCTAATGTGGCTATGGCTGCAATTCCTGCAACATCAACAATGGCTTTTGGTGGAGTTGTTACTGCTACTAGTGGTGATGTTAATGTGAATAGGGTTGTTTCTGATGATGAGAGATCAGATTATGGAGGATTAATCGGATCTCGAAAACCTCCTTTACCGTTGCAGCTTGTTCAACCAAGGACTAGTGGTGGTGTGAGTCTTCCATCACCAGATTCAGTTACAAGTGATAGCAGTAGTATTGCATCTACAAATTCTTTCTCCAAAATTATATATCATCAAGAACAAGTCCAAGGTACAAATATAGAGAACAAACCTCAAGATTCAAGTTACATGTTACCACCACAATCAGATCCAAATCAACAACTCCAACAACCACCACAACAACAACAACAATTTGTTCACCCCAACACTCACTATATACACCACCCTACATCCACAAATCAAGTTCCAATTACATCTTACTACCAAGTTTACCCTCCACCATCACAACAATCACAACTTCACCATCCACAACAATATCCAGTTTATGTAATGCCTATTGGATCTACACAACAACCATATAACATGACATTGCAACATAATATAAATGACCCTAATGTGGTAGCTTCTAGTAGACCAATAATACCACAAAATGGAACTCCACCAATTTACCCTAATAAAGCACCTAACCCTAATGTGGCATCAAATTCAACATTTGTTCAAGTACCTTCAAATCAATTTCAACAACAATATGTTGGTATGCCTCAATTTCATCATCAACCACAACATCCTATTAATGTAGCTCCTCCTAGTGGTACTAATTATGGTTATGAATATAGTGGTAATGTGGAAGGTCAAGTGTACTATACTCAACAGCAAAATAATGCTCCTTTGGTTACTCAATACCAATCCATGACTCCTGCAGCTGCTGCTGCAGCATTATCAGATGCTTCCCAACAATTTCCTGGAGAAAATGTTCAGCAGTCAAATAGAACTTCGCAGCCAGTATAA 1920 0.4005 MDPPLISTAATTIPHNIIQQNYPESVESLSSPPPQPPPRSRVNETMNDDSFPNVPGGKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRSSSLRDLCSRLSRTILNGRPFTLKYQLPNEDLDNLITVTSDEDLDNMIEEYDRIASASSTMKPSSSRLRVFLFFTKPDTTLSMGSLLDDAKSETWFVDALNNSGILSRGVSDSAGDSFVNLDSVPASDSSNNLESQVESLTLLENNNNKVKNVLDNVNVVNSTPNSPMLENSLSSSSLTPSMENLPPIRVRVDENAGSRLQQENKVVMKQDGGFVVSSANVAMAAIPATSTMAFGGVVTATSGDVNVNRVVSDDERSDYGGLIGSRKPPLPLQLVQPRTSGGVSLPSPDSVTSDSSSIASTNSFSKIIYHQEQVQGTNIENKPQDSSYMLPPQSDPNQQLQQPPQQQQQFVHPNTHYIHHPTSTNQVPITSYYQVYPPPSQQSQLHHPQQYPVYVMPIGSTQQPYNMTLQHNINDPNVVASSRPIIPQNGTPPIYPNKAPNPNVASNSTFVQVPSNQFQQQYVGMPQFHHQPQHPINVAPPSGTNYGYEYSGNVEGQVYYTQQQNNAPLVTQYQSMTPAAAAAALSDASQQFPGENVQQSNRTSQPV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2133 639 Gene3D - 78 166 - -
Mtr6g2133 639 SMART PB1_new 73 165 IPR000270 GO:0005515
Mtr6g2133 639 MobiDBLite consensus disorder prediction 369 390 - -
Mtr6g2133 639 MobiDBLite consensus disorder prediction 24 53 - -
Mtr6g2133 639 Pfam PB1 domain 74 165 IPR000270 GO:0005515
Mtr6g2133 639 ProSiteProfiles PB1 domain profile. 58 165 IPR000270 GO:0005515
Mtr6g2133 639 CDD PB1_UP2 62 165 - -
Mtr6g2133 639 MobiDBLite consensus disorder prediction 347 390 - -
Mtr6g2133 639 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 632 - -
Mtr6g2133 639 MobiDBLite consensus disorder prediction 412 441 - -
Mtr6g2133 639 MobiDBLite consensus disorder prediction 621 639 - -
Mtr6g2133 639 SUPERFAMILY CAD & PB1 domains 74 176 - -
Mtr6g2133 639 MobiDBLite consensus disorder prediction 609 639 - -
Mtr6g2133 639 PANTHER OS05G0427100 PROTEIN-RELATED 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2133 Mtr-Chr6 38161359 38164926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2133 58 194 MAP Kinase Kinase Kinase AT5G57610 44.203 3.24e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3835 8 49017781 49019766 Mtr6g2133 6 38161359 38164926 ECH
Mtr1g4161 1 53200265 53203167 Mtr6g2133 6 38161359 38164926 ECH
Mtr6g2133 6 38161359 38164926 Mtr6g2133 6 38161359 38164926 ECH