Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2117 ATGTCTCTTCATTCTTCATTGATTGTTGAAGAAACAAAACAAAACAAGGAAGAAGAAAGAAGAAAATTGGTTGAAGAAGTGAAGACACAATTATGGTTATCAGGACCATTGATATCAGTTACACTCTTAAATTATGGTATCAATATTATTTCACTTATGTTTGTTGGTCATCTTGGTGAGTTATCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCTTCTGTTACTGGTTTCAGTTTATTGATAGGAATGGCAAGTGCCTTAGATACATTATGTGGACAATCATATGGCGCAAAGCAGTACCGCATGTTAGGCATACACATGCAAAGAGCAATGTTCATTCTCATGATCGTCGCCATTCCCCTCGCGATTATCTGGGCAAACACAAGATCCATTCTGATTTTACTTGGCCAAGATCTTGAAATATCTACTGAAGCTGGAAGCTATGCTAAGTTAATGGTTCCCTGCCTTTTTGCTTACGGTCTTCTACAATGTCTCAACAGATTCTTACAGACTCAAAATATTGTATTTCCAATGATGTTTAGCTCCGCTGTTACAACATTACTTCATCTTCCTCTATGTTGGTTTATGGTATACAAATCTGGATTAGGTAGTGGAGGCGCTGCCATAGCAAGTTCTATATCCTATTGGCTGAATGTTATCATACTCGCACTCTATGTCAAGTTTTCTCCTTCATGTAAAAAAACATGGAATGGTTTTTCCAAGGAAGCACTTGCGCTAAACAATATCCCAATTTTCCTGAAGCTTGCCATTCCTTCAGCTGTAATGGTTTGCATGGAAATGTGGTCATTTGAATTGATGGTTCTCCTTTCTGGTGTTCTTCCAAATCCAAAGTTGGAAACATCTGTGCTTTCTATCTGTTTAAATACAACAGCAGCAGTTTTTATGATCCCCTTTGGACTTAGTGGAGCTGTAAGCATTCGTGTTTCAAATGAACTTGGTGCTGGTCATCCACAGGCTGCGCGTTTGGCAGTTTGCGTCGTTGTAGTGATTGCCGTTATTGAGAGCATCTTAGTTGGCGGAGTGATTATACTAGTTCGTAATTTATGGGGCTACGCTTATAGCAATGAAGAAGAAGTGGTAAATTATGTAGCAACTATGATGCCAATTCTTGCCGTATCCCACTTACTAGATGGCATGCAAGCTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATTTGTTAATCTTGGATCATATTATTTAATTGGGATTCCAGCCGCTGTTGTATTCGCTTTTGTACTACATATTGGCGGGAAGGGGTTGTGGTTGGGGATTATATGTGCCCTCATCGTTCAAGCGCTTTGTCTAATGATCATTACAATACGCACTGATTGGGAGAAAGAGGCAAACAAGGCTACTGATAGAGTTCATAATGCAATAACAACAGAGAGCTTAGTCTCCTGA 1443 0.3985 MSLHSSLIVEETKQNKEEERRKLVEEVKTQLWLSGPLISVTLLNYGINIISLMFVGHLGELSLSGASMATSFASVTGFSLLIGMASALDTLCGQSYGAKQYRMLGIHMQRAMFILMIVAIPLAIIWANTRSILILLGQDLEISTEAGSYAKLMVPCLFAYGLLQCLNRFLQTQNIVFPMMFSSAVTTLLHLPLCWFMVYKSGLGSGGAAIASSISYWLNVIILALYVKFSPSCKKTWNGFSKEALALNNIPIFLKLAIPSAVMVCMEMWSFELMVLLSGVLPNPKLETSVLSICLNTTAAVFMIPFGLSGAVSIRVSNELGAGHPQAARLAVCVVVVIAVIESILVGGVIILVRNLWGYAYSNEEEVVNYVATMMPILAVSHLLDGMQAVLSGTARGCGWQKIGAFVNLGSYYLIGIPAAVVFAFVLHIGGKGLWLGIICALIVQALCLMIITIRTDWEKEANKATDRVHNAITTESLVS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2117 480 Coils Coil 9 29 - -
Mtr6g2117 480 PANTHER PROTEIN DETOXIFICATION 11 468 - -
Mtr6g2117 480 CDD MATE_eukaryotic 26 464 IPR045069 GO:0042910|GO:1990961
Mtr6g2117 480 Pfam MatE 36 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2117 480 Pfam MatE 259 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2117 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 468 - -
Mtr6g2117 480 TIGRFAM matE: MATE efflux family protein 36 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2117 Mtr-Chr6 37864800 37876350 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4142 1 52956974 52960977 Mtr6g2117 6 37864800 37876350 ECH
Mtr6g2117 6 37864800 37876350 Mtr6g2117 6 37864800 37876350 ECH
Mtr8g3848 8 49159205 49162061 Mtr6g2117 6 37864800 37876350 PCT