Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2115 ATGATAATTGGCTTATGCAGAAAAGATATCACAGAAGAGGTGAAGAAGCAGCTATGGCTTGCAGTGCCAATGATATTTGCAAGTGTGTTTCAATACAGCTTACAAATGATATCTCTCATGTTTATAGGCCATATGAATGATGAGGTGCTTCTAGCTGGTGCTGCTTTGGCAAATTCAGTTACGAGTGTTTTTGGTTATAGTGTATTGGTAGGTTTCTCATGTGCACTAGAAACATTTTGTGGTCAATCATATGGAGCACAAAAATACCATATGGTGGGAATACACTTGCAGAGAGCCATATTGATAAACATGCTTCTTACTATACCTCAGTCCATTATTTTGGCAAACCTAAGGCCTATTCTAATTTTTTTATATCAAGACCCAAATATAGCTGCAGAAGCTGGATTCTATGGAAGATATTTGATCCCAAACGTTTTTGCAAATGCTATTTTTAGTTGTATAGTAAAATTTCTACAAACTCAGAACATAGTAGTTCCTATGTTGCTAGCTTCTGGAATTACTAGCTTGGTACACTTTCTCAACTGTTGGATTTGGATTATAAAATTAAGGCATGGAATCAAAGGAGCTGCAATTGCAACTTGCATTTCAAATTGGCTTTACACAGTGCTACTAGTACTTTACATAAAATTCTCATCTTCTTGCAGAAGTACTTGGACTGGTTTCTCAAGGGAGTCATTGCATAACATCCCTCAATTCCTCAGGATTGCTTTTCCTTCAGCAATCATGGTCTGCTTAGAATCATGGATGTATGAAATAATGGTGCTCCTATCCGGTACTCTTCCTAATCCAAAATTGCAAACATCGGTACTTTCTTTATGCATGAGTATAGCAGCAGTTGTGTGGATGATTTCCTTTGGACTAAGTGGAGCTGCAAGCGTTCGTGTTTCAAATGAACTTGGAGCAGGTAATGCTAGGGCTGCACGTTTGGCAGTGTGTGTTGTTGTAGTGATTGTTGTTACCCAAGCAATCTTAGTCGGAACAGTGATGATACTGTTACGCAATATTTGGGGGTATGCTTATACCAGTAAAGTTGAAGTGGTTAAACAAATAGCAATTATGCTTCCAATTCTTGCAGCTGGCAACCTCATTGATGCACTACAAAGTGTTCTTGCAGGCATTGCTAGAGGATCTGGTTGGCAAAAAGCTGGTGCGATTGTCTATTTGGGGTCATGCTATTTAGTTGGGATTCCAGCAGCCATAATATTTGCTTTTGTACTGCATACTGGTGTTAAGGGGCTATGGTTTGGGATCATATGTGCACTCATTGCTCAAGCCTTTTCTCTAATGATCATTACATTACGCACTGATTGGGAGAAAGAGGCAAACAAGGCTAAAGATAGAGTTTATAAATGTATAACACCAGAGAGTTTAGTCTCATGA 1401 0.3876 MIIGLCRKDITEEVKKQLWLAVPMIFASVFQYSLQMISLMFIGHMNDEVLLAGAALANSVTSVFGYSVLVGFSCALETFCGQSYGAQKYHMVGIHLQRAILINMLLTIPQSIILANLRPILIFLYQDPNIAAEAGFYGRYLIPNVFANAIFSCIVKFLQTQNIVVPMLLASGITSLVHFLNCWIWIIKLRHGIKGAAIATCISNWLYTVLLVLYIKFSSSCRSTWTGFSRESLHNIPQFLRIAFPSAIMVCLESWMYEIMVLLSGTLPNPKLQTSVLSLCMSIAAVVWMISFGLSGAASVRVSNELGAGNARAARLAVCVVVVIVVTQAILVGTVMILLRNIWGYAYTSKVEVVKQIAIMLPILAAGNLIDALQSVLAGIARGSGWQKAGAIVYLGSCYLVGIPAAIIFAFVLHTGVKGLWFGIICALIAQAFSLMIITLRTDWEKEANKAKDRVYKCITPESLVS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2115 466 CDD MATE_eukaryotic 13 450 IPR045069 GO:0042910|GO:1990961
Mtr6g2115 466 TIGRFAM matE: MATE efflux family protein 23 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2115 466 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 454 - -
Mtr6g2115 466 PANTHER PROTEIN DETOXIFICATION 2 454 - -
Mtr6g2115 466 Pfam MatE 23 184 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2115 466 Pfam MatE 245 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2115 Mtr-Chr6 37850171 37855176 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3848 8 49159205 49162061 Mtr6g2115 6 37850171 37855176 ECH
Mtr6g2115 6 37850171 37855176 Mtr6g2115 6 37850171 37855176 ECH