Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2113 ATGAAAATAGGGAGAAGGGAGATTATTGAAGAATCAAAGAAGCAGCTATGGCTAGCAGGGCCATTGATATTTGTGTGTGTGTTTCAAAACAGCTTACAAATTATATCTCTCATGTTTGTTGGACGTTTAGATGAGTTGCTTCTTGCTGGTGCTTCTTTGGCTATTTCATTTGTCAATGTTACTGGCTTCAATGTATTGATGGGTATGTCAAGTGCATTAGACACATTTTGTGGGCAAGCATATGGAGCACAACAATATCATATGGTTGGAATATATACACAAAGAGCAATGTTGGCAACCACCCTTGTTAGTATACCTTTATCATTTATTTTGGCATACTTAAAACCGATTTTGATAATTTTACGTCAAGACAAAACTATTGCAGCACAAGCTCAACTATTTGCTCGTTACTCAATTCCAAGCCTTTCAGCCAATGCCCTTCTTAGGTGCCTTGTTAAATTCCTACAAACACAAAATATAATTTTTCCAATGGTGCTTGCTAATGGAGTCACTAGCTTGATACATGTTTTTCTATGTTGGGCTTTGGTTATAAAATTTGGATTTGGTATTAAAGGAGCTGCTATTGCAATCTGTATCTCAAATTGGCTTAATGTGGCAATGTTGGCAATTTACATGAAGTTCTCATCTTCATGTAAAAAGACTTGGGTTGGTTTGTCAATGGAATCCTTGCACAACATCCCTCAATTTCTCAAACTCGCATTTCCTTCGGCAGTCATGGTTTGCTTAGAATCATGGACATTTCAAATAATGGTGCTCCTGTCTGGTGCTCTTCCCAATCCACAGTTGCAAACTTCAGTCCTTTCTATATGTGTTAATATATCCGGTATGCTTTGGATGGTACCGTTTGGAATTAGTGTTTCTGCAAGTACAAGAATCTCAAATGAACTAGGAGCTGGATGTCCAAATGCTGCTTATTTAGCTGTAATAGTAACCTTATTCATGTCATTTGCTTGTGGAGTTCTAGAGTTTGCTTTCATTATGTCACTATGGAAAGTTTGGGGAAAGGCTTTTAGCCATGTGCATGAAGTAGTCACATATGTGAATTCAATGACACCGGTTGTTGCAATATCTGCCTTTGTAGATTCATTTCAAACTCCACTCCAAGGTGTTGCTAGAGGATGTGGTTGGCAGAAGCTTGGTGCATTTGTTAATTTAGGAGCTTATTATCTTGTTGGCATTCCCATTTCTGTTGTATTTGCTTTTGTCTTCCACATGAAGGGACAGGGGCTATATTTAGGACTTGTGATAGCACTTGTTGTGCAAGTGGTGTGTTATCTTCTTGTCACCTTGTGCACCAATTGGGAAAAAGAAGCAAAGAAGGCTGCAATAAGAGTACGAGGCAATGGAGTCCAAGTTAATGCACATCCACATGACCAAAATGTTTCTGCTCCGTAG 1416 0.3863 MKIGRREIIEESKKQLWLAGPLIFVCVFQNSLQIISLMFVGRLDELLLAGASLAISFVNVTGFNVLMGMSSALDTFCGQAYGAQQYHMVGIYTQRAMLATTLVSIPLSFILAYLKPILIILRQDKTIAAQAQLFARYSIPSLSANALLRCLVKFLQTQNIIFPMVLANGVTSLIHVFLCWALVIKFGFGIKGAAIAICISNWLNVAMLAIYMKFSSSCKKTWVGLSMESLHNIPQFLKLAFPSAVMVCLESWTFQIMVLLSGALPNPQLQTSVLSICVNISGMLWMVPFGISVSASTRISNELGAGCPNAAYLAVIVTLFMSFACGVLEFAFIMSLWKVWGKAFSHVHEVVTYVNSMTPVVAISAFVDSFQTPLQGVARGCGWQKLGAFVNLGAYYLVGIPISVVFAFVFHMKGQGLYLGLVIALVVQVVCYLLVTLCTNWEKEAKKAAIRVRGNGVQVNAHPHDQNVSAP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2113 471 CDD MATE_eukaryotic 11 447 IPR045069 GO:0042910|GO:1990961
Mtr6g2113 471 PANTHER PROTEIN DETOXIFICATION 3 452 - -
Mtr6g2113 471 PANTHER MULTIDRUG RESISTANCE PROTEIN 3 452 - -
Mtr6g2113 471 Pfam MatE 21 180 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2113 471 Pfam MatE 242 404 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g2113 471 TIGRFAM matE: MATE efflux family protein 21 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2113 Mtr-Chr6 37785433 37795831 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4141 1 52944609 52948018 Mtr6g2113 6 37785433 37795831 ECH
Mtr6g2113 6 37785433 37795831 Mtr6g2113 6 37785433 37795831 ECH
Mtr6g2113 6 37785433 37795831 Mtr8g3848 8 49159205 49162061 PCT