Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr6g1812 | ATGGAGGAATCACCATCAACATCAAGAAAATCTCTGATGGAGAATCTATTAGGCCTTCTGAGGGTTCGTGTGAAGCGTGGTGTTAACCTTGCTGTTCGTGATGTTCGTAGCAGTGATCCTTATGTTGTTATCAAGATGTATAATCAGAAACTTAAGACTCACGTTAAAAAAAAGAATGTTAATCCTGAGTGGAATGAAGACCTTACTCTGTCTGTTATAGATCCTAATCACCCAGTTACATTGACTGTGTATGATCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGTATTTGACGCCTCGACCTTCATAGAAGCCCTGAGGATGAATGTAACCGGCCTTGCAAACGGCACCGTACTCAAGCGGATACCACCAAGCAAACACAACTGCCTTGCCGAGGAGAGCTGTATCTATTATAGCAATGGCAAAATTATCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTTGAAATCACTTTGCACTGGATTGATCTTCCTGGTTCTAAAGGTTTATAA | 534 | 0.4064 | MEESPSTSRKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMYNQKLKTHVKKKNVNPEWNEDLTLSVIDPNHPVTLTVYDHDTFSKDDKMGDAVFDASTFIEALRMNVTGLANGTVLKRIPPSKHNCLAEESCIYYSNGKIIQDMILRLQNVECGEVEITLHWIDLPGSKGL* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr6g1812 | 177 | CDD | C2_ArfGAP | 17 | 160 | - | - | |
| Mtr6g1812 | 177 | Gene3D | C2 domain | 14 | 175 | IPR035892 | - | |
| Mtr6g1812 | 177 | Pfam | C2 domain | 18 | 105 | IPR000008 | - | |
| Mtr6g1812 | 177 | SMART | C2_3c | 19 | 114 | IPR000008 | - | |
| Mtr6g1812 | 177 | PANTHER | CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN | 8 | 176 | - | - | |
| Mtr6g1812 | 177 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 14 | 103 | IPR035892 | - | |
| Mtr6g1812 | 177 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 8 | 176 | IPR044562 | - | |
| Mtr6g1812 | 177 | ProSiteProfiles | C2 domain profile. | 4 | 115 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr6g1812 | Mtr-Chr6 | 33009083 | 33011669 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr6g1812 | 50 | 177 | C2H2 Transcription Factor Family | AT1G70790 | 60.000 | 7.06e-51 | 159 |
Event-related genes