Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0332 ATGCGTTACCTTGGTGCTTTAGATTCACTCTTTGGCGTATCTGATATTTTGAAAATGGATGGATCAGCTGGACCTGGTGGTGGAAATGTGAATGCATTTCTACGGAACTATAAAATGGGGAAAACACTTGGAATTGGCTCGTTTGGCAAAGTAAAAATTGCGGAGCATGTACTGACTGGGCACAAAGTTGCCATTAAGATTCTCAATCGCCGGAAGATAAAAAATATGGAAATGGAAGAGAAGGTGAGAAGAGAAATTAAGATTTTAAGATTGTTCATGCACCATCACATCATACGCCTTTATGAGGTTGTGGAAACCCCTACAGACATTTATGTTGTGATGGAGTATGTGAAATCCGGAGAGCTCTTTGATTACATTGTAGAAAAGGGTAGGCTACAAGAAGATGAAGCCCGCAGTTTCTTCCAGCAGATAATATCTGGTGTGGAATACTGTCATAGGAATATGGTAGTTCATAGAGACTTGAAGCCTGAGAATTTACTTTTGGACTCAAAATGGAGTGTCAAGATTGCTGATTTTGGCCTGAGCAACATCATGCGTGATGGCCACTTTCTTAAGACAAGTTGTGGAAGCCCTAACTATGCAGCTCCCGAGGTTATCTCTGGGAAATTATATGCTGGACCTGAGGTAGATGTTTGGAGCTGTGGTGTAATTTTATATGCACTTCTCTGTGGCACTCTACCTTTTGATGATGAAAATATTCCCAACCTCTTCAAAAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATCTATCTCCTGGTGCCAGAGATTTGATACCGAGGTTGCTTGTGGTGGATCCCATGAAAAGGATGACCATACCTGAGATACGCCAACACCCATGGTTCCAACTTCATCTGCCTCGCTATTTGGCTGTGCCACCACCAGATACACTTCAACAGGCCAAAAAGATTGATGAGGAGATTCTTCAGGAGGTGGTTAATAGGGGATTTGCTAGGGAACCATTGGTTGACTCCCTTAAGAACAGGGTACAAAATGAGGGTACCGTGACTTACTATTTGTTATTGGACAACCGTTATCGTGTCTCCACTGGCTATCTCGGTGCTGAGTTTCAAGAGACAATGGATTCTGGTTTGAACCGTATCCACTCTGGTGAAGTTGCTTCTCCAGTCGTTGGACACCGCTTTCCAGGATATATTGATTACCAAGGAGTAGGAATGAGGCAACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCGCAGCCTCGTGAAATAATGACCGAAGTCCTTAAAGCTCTGCAAGAACTGAATGTCTGTTGGAAAAAAATTGGACCCTATAACATGAAGTGCAGATGGGCCGTTGGCATCCCTGGTCATCATGGAGGAAATGACAGCATTATTGAGAACGAAGCTGTTCCTAAGACAACTGTAGTCAAGTTTGAACTGCAGCTGTACAAAACTCAGGAGAAATATCTGCTTGATCTTCAAAGACTTGAGGGACCCCAGTTTCTTTTCTTGGATCTTTGTGCTGCCTTCCTTGCGCAGCTTCGTGTTCTGTAG 1554 0.435 MRYLGALDSLFGVSDILKMDGSAGPGGGNVNAFLRNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRLLVVDPMKRMTIPEIRQHPWFQLHLPRYLAVPPPDTLQQAKKIDEEILQEVVNRGFAREPLVDSLKNRVQNEGTVTYYLLLDNRYRVSTGYLGAEFQETMDSGLNRIHSGEVASPVVGHRFPGYIDYQGVGMRQQFPAERKWALGLQSRAQPREIMTEVLKALQELNVCWKKIGPYNMKCRWAVGIPGHHGGNDSIIENEAVPKTTVVKFELQLYKTQEKYLLDLQRLEGPQFLFLDLCAAFLAQLRVL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0332 517 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 27 516 - -
Mtr6g0332 517 SMART serkin_6 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0332 517 CDD AMPKA_C 407 514 - -
Mtr6g0332 517 SUPERFAMILY KA1-like 346 516 IPR028375 -
Mtr6g0332 517 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Mtr6g0332 517 CDD STKc_AMPK_alpha 34 289 - -
Mtr6g0332 517 CDD UBA_SnRK1_plant 311 351 - -
Mtr6g0332 517 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 469 516 IPR001772 -
Mtr6g0332 517 Pfam Kinase associated domain 1 474 516 IPR001772 -
Mtr6g0332 517 ProSiteProfiles Protein kinase domain profile. 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0332 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Mtr6g0332 517 Gene3D Transferase(Phosphotransferase) domain 1 28 368 - -
Mtr6g0332 517 PANTHER SERINE/THREONINE KINASE 27 516 - -
Mtr6g0332 517 SUPERFAMILY Protein kinase-like (PK-like) 34 303 IPR011009 -
Mtr6g0332 517 Pfam Protein kinase domain 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0332 517 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 310 350 IPR015940 -
Mtr6g0332 517 Gene3D Kinase associated domain 1, KA1 413 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0332 Mtr-Chr6 3988587 3996610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0332 37 289 CBL-interacting serine-threonine protein kinases AT4G24400 51.575 7.45e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mtr6g0332 Pkinase 2.1e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0332 K07198 - gmx:547544 900.582