Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3061 ATGGAGGCTTTGAGCTTGAACAAAAAAATGTTGTTGATGATGATTATGACGGCTATGATTTGGAACATGGCAAAAGCTGAGGAGCATTTTGTTGGAGGGGGAAGGCAAGGATGGAACCCTAGTAATAACTTGACAAAATGGTCCTTGAATGAGCACTTTCATGTGAATGATTGGCTATTTTTTGGATATGATAAGCTCTATTTCAATGTGTTGGAGGTGAACAAGACAAGCTATGAAAACTGCATAGATACAGGGTTCATCAAGAACATAACAAGGGGCGGTGGAAGAGATGTTTTTCTGCTAACTGAGGCCAAGACCTATTACTTCATAAGCGGAGGAGGTTTCTGTCAGCGCGGAGTGAAGGTCGCAATCGATGTTAATGAACATGTTGCACCAGCTCCTCAGCCTACTCCCCACAAAGGTTCAAATGCTTCAAACATTTAA 444 0.4189 MEALSLNKKMLLMMIMTAMIWNMAKAEEHFVGGGRQGWNPSNNLTKWSLNEHFHVNDWLFFGYDKLYFNVLEVNKTSYENCIDTGFIKNITRGGGRDVFLLTEAKTYYFISGGGFCQRGVKVAIDVNEHVAPAPQPTPHKGSNASNI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3061 147 Coils Coil 147 147 - -
Mtr5g3061 147 Gene3D - 25 131 IPR008972 -
Mtr5g3061 147 PANTHER BLUE COPPER PROTEIN 10 133 IPR039391 GO:0009055
Mtr5g3061 147 Pfam Plastocyanin-like domain 38 119 IPR003245 GO:0009055
Mtr5g3061 147 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
Mtr5g3061 147 PANTHER OS03G0758500 PROTEIN 10 133 - -
Mtr5g3061 147 SUPERFAMILY Cupredoxins 26 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3061 Mtr-Chr5 39369185 39370720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3061 10 146 Phytocyanin Superfamily AT2G27035 43.066 2.23e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3061 - - mtr:MTR_5g088180 239.195