Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1989 ATGGCTTTGAAAGAGAGATTGGCTTCATCTTCTGAAACGACGTCGTCACAAGATGAACAAAAAAGATACGTTACGTGGGAAGAGAAATTTGTGTCGATGGATAAAGGTAGAAGAGAGGTTCGTTATTTTCTGAAGAAGAAAAATGGTGAATTGGATCTTGCTCTTATTGGTAAAGAGAAGAGTTCTAGGCATATGAGTTATCATTATGCGATTAGAAACTCTTCTTTTGCTCCTTTTTTTAGACTTAAATCTCGTAGAGAAGTTGTTAATTGGTTAGATTCTATTGTTCAAGATTCTTCTTCCAGGGATGCGAATATGGCTGTCAGAGAACATGGTTATGAACCTGAGATTGGAGCATTGAAGGATAATCAACTGCTATCTCTGAACCCTTGTTCAAAAGAATTCACATGGTTAGGGTTACCTTGGACATGTAGGAAAAGAAGAAACCACTATCAGGCATTTCGGAAGGACGGCTTTCAGATATCTGTGTATGATTTTGTGTTTGTTTTAGCAGAGGAGAACAAACGTCTGGTTGCCTACTTGGAAGACATGTACGAGGGTTCCAAAGGCAACAAGATGGTTGTAGTTCGCTGGTTTCACAGAATTGACGAGGTTGGTTTTGTTTTGCCCCACAGTTTTAGTGAAAGAGAGGTTTACTTTTCTCCTTATCTACAACGTCTGAGTATTGAATGCATAGATGGTTTGACTTCCGTCCTCAGTCCACAGCACTACGCCAAGTTTCGGAACAAAGCTCGACACGCTCGTCCAGAACCATATGTGTGCAGCAAGAAGTTTGGTAAGGATGATGTCAAGGATTTTGATATAACTCAAATGGAGGGTTATTGGAAACAGGAAATACTGAAGCAAATGTATCCCCACGTGGAGTCAAACTCCAGTGGTAGTTCAGGGAAATCTGATGATGGACCAGAACTGGAAGAAAACCTCCATTCTTCTTCTGCGATAAGACCAAAGAAGAAGCAGCGGTGTACAAAGGTTGATGGAAAAGATGCTGTTGAGTTAGGTTCTCTTCAATTAGAAAAATTGAGTAATTGTAAGATTGATGCCAAAACCAGTAGCGGTAACAAGTTGGAGGGTTCTGTAAAACTGGTTGGAACCACCAAGTTGGCCACAATCAAAGAGACAAATGAAGCTTCACAGTATTTAGCTGTAGGTTCCAATGTTGAGGTCCTCTCTCAAGACAGTGGGATTAGAGGTTGTTGGTTTAGAGCTTCTGTTATCAAGAGGCACAAAGACAAAGTGAAGGTGCAATATCATGACATCCAGGATGCAGAGGATGAAGCTAACAACCTTGAGGAATGGATTTTAGCTTCTAGACCTGTGGTACCTGATGATCTGGGTCTCCGAGTAGAAGAGAGGACCAAGATCCGACCACTATTAGAGAAACGTGGAATATCTTTCGTGGGTGATGTTGGTTACATTGTTGATGCCTGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCAAAAAGAATCTGATGATAAATATCATGTTTATTTCCCAGGGGAAAAGAAGATGTCAATATTTGGACCATGTAACTTGAGGCATTCTCGAGATTGGACAGGGAATGGATGGGTAAAGGTGAGGGAAAGGCCTGATATTGTGACCTGTAAATTATCAAGCTTAAAAGCAAAACAAAGTTCCTGCAAATCTGAGGAGGACAGCAAATCAACTGTAGCATCTATCGGAGATGGAATACAATCTAAGCAGGCTGATGCTTACTCGGGTTCTTCTGAAAGGGATAAACTTAGAAAGAATGAGGAAGTTCCAGATCTTGTGAAGGATGTTTTATCATTACAGTTAAGGTGGAAGTCATCAAGGAAGAGGAATCGAAGTGGCACTTCTCAGCAGAAGCAACAGAGCAATGACATACATAGGAAACTGTCGCCGAAGTTTCTGCAGTCTGATGCTACTGATAGTTTTGTGGTTCCAGCTTCATTGAAGGTTGATCATGATGACTATAAATACCAGGGAGATCCTTCCATTTTCGGTTCCTCAGTCGTGCCGTCTTTAACCAACATGGTTATGTGTAGGTGA 2058 0.413 MALKERLASSSETTSSQDEQKRYVTWEEKFVSMDKGRREVRYFLKKKNGELDLALIGKEKSSRHMSYHYAIRNSSFAPFFRLKSRREVVNWLDSIVQDSSSRDANMAVREHGYEPEIGALKDNQLLSLNPCSKEFTWLGLPWTCRKRRNHYQAFRKDGFQISVYDFVFVLAEENKRLVAYLEDMYEGSKGNKMVVVRWFHRIDEVGFVLPHSFSEREVYFSPYLQRLSIECIDGLTSVLSPQHYAKFRNKARHARPEPYVCSKKFGKDDVKDFDITQMEGYWKQEILKQMYPHVESNSSGSSGKSDDGPELEENLHSSSAIRPKKKQRCTKVDGKDAVELGSLQLEKLSNCKIDAKTSSGNKLEGSVKLVGTTKLATIKETNEASQYLAVGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVPDDLGLRVEERTKIRPLLEKRGISFVGDVGYIVDAWWHDGWWEGIVVQKESDDKYHVYFPGEKKMSIFGPCNLRHSRDWTGNGWVKVRERPDIVTCKLSSLKAKQSSCKSEEDSKSTVASIGDGIQSKQADAYSGSSERDKLRKNEEVPDLVKDVLSLQLRWKSSRKRNRSGTSQQKQQSNDIHRKLSPKFLQSDATDSFVVPASLKVDHDDYKYQGDPSIFGSSVVPSLTNMVMCR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1989 685 Gene3D - 131 275 IPR043151 -
Mtr5g1989 685 Pfam BAH domain 161 264 IPR001025 GO:0003682
Mtr5g1989 685 Coils Coil 413 433 - -
Mtr5g1989 685 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 12 684 - -
Mtr5g1989 685 SMART BAH_4 159 276 IPR001025 GO:0003682
Mtr5g1989 685 MobiDBLite consensus disorder prediction 294 328 - -
Mtr5g1989 685 MobiDBLite consensus disorder prediction 612 632 - -
Mtr5g1989 685 SMART agenet_At_2 473 529 IPR014002 -
Mtr5g1989 685 SMART agenet_At_2 386 452 IPR014002 -
Mtr5g1989 685 MobiDBLite consensus disorder prediction 306 328 - -
Mtr5g1989 685 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 12 684 - -
Mtr5g1989 685 Pfam Agenet domain 391 465 IPR008395 -
Mtr5g1989 685 ProSiteProfiles BAH domain profile. 159 276 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1989 Mtr-Chr5 24783388 24787243 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1989 5 24783388 24787243 Mtr5g1989 5 24783388 24787243 ECH