Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1985 ATGGCTCCAAAATCCGATAGCGCTGAAGCAATCGTGTTGAACTTCGTCAACGAGCAAAATAGGCCGCTGAATACGCAAAATGTGGCGGATGCGTTGCAAAAGTTTAATCTGAAGAAAGCGGCGATACAGAAAGCGTTGGATAGTCTTGAAAAAGGCGGGAAGATTTCGTTTAAGGAGTATGGTAAGCAGAAGATATACGTTGCTCGACAAGATCAGTTTGAGATTCCGAATAATGAAGAGCTTAATCAGATGAAGGAAAAGAATGCTAATTTGCAGAAGCAGCTTGAGGAACAGAAGAAGGTTATTGGTGAGGTTGAAGCAGAAATTAAGTCGTTGCAATCAAATTTAACAATGGAGCAGATCTGTGAAAAAGAAATTGACCTTCGAATGCAGGTTCAAGAACTGGAGATCAAGTTGAACAAGTTACGTGGAGGTGTTACTTTGGTGAGGCCAGAAGAACGTGTGGCAGTTGAGAGTATGTTGTCGGAGAAAATAAGTCAGTGGAGGAAGCGTAAAAGAATGTTCAGGGATTTATGGGATACCCTCACTGAGAACTCACCTAAGGATCCCAAAGAATTTAAGGAGGAGCTTGGGCTAGAATATGATGAAGATGTTGGTGTGAGTTTGCAGTCATGCAGTGACCTGATACCGCAAGGTAAGAAGCGGCCAAGGGGACAGTGA 681 0.4302 MAPKSDSAEAIVLNFVNEQNRPLNTQNVADALQKFNLKKAAIQKALDSLEKGGKISFKEYGKQKIYVARQDQFEIPNNEELNQMKEKNANLQKQLEEQKKVIGEVEAEIKSLQSNLTMEQICEKEIDLRMQVQELEIKLNKLRGGVTLVRPEERVAVESMLSEKISQWRKRKRMFRDLWDTLTENSPKDPKEFKEELGLEYDEDVGVSLQSCSDLIPQGKKRPRGQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1985 226 Pfam Leucine zipper with capping helix domain 149 206 IPR040661 -
Mtr5g1985 226 Gene3D - 1 79 IPR036388 -
Mtr5g1985 226 PANTHER TBP-1 INTERACTING PROTEIN 1 221 IPR040461 GO:0007131
Mtr5g1985 226 Coils Coil 77 115 - -
Mtr5g1985 226 Pfam TBPIP/Hop2 winged helix domain 8 68 IPR010776 -
Mtr5g1985 226 SUPERFAMILY "Winged helix" DNA-binding domain 6 74 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1985 Mtr-Chr5 24756560 24759092 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1985 5 24756560 24759092 Mtr5g1985 5 24756560 24759092 ECH