Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1975 ATGAAGAGTGCGATTTGTAGGAGTATGGGTCTCTCTCCCAACCATCTCTTCATATCAGGGGACAGATATTCTTTTTGTAAAGGCCCATATTCCAATCTCTGTGTTCCCATGGCTGTGTTAACAAAGGGATCTGGTAAAGGGGGAGGAATCCTGGAAAAGCCAGTTATTGAGAAAGCCACCCCAGGCCGGGAATCTGAATTTGATTTGAAGAAATCACGGAAAACAGCGCCGCCATATCGTGTAATATTGCACAATGACAACTTCAACAAACGGGAGTATGTTGTCCAAGTACTTATGAAGGTGATCCCTGGAATGACCCTTGATAATGCAGTTAACATCATGCAAGAAGCTCACCACAATGGAATGTCAGTGGTGATCATCTGTGCCCAAGCCGACGCTGAAGATCATTGTATGCAACTTAGAGGCAATGGATTACTCAGTTCAATTGAACCTGCAGGTGATGGTTGCTGA 471 0.4459 MKSAICRSMGLSPNHLFISGDRYSFCKGPYSNLCVPMAVLTKGSGKGGGILEKPVIEKATPGRESEFDLKKSRKTAPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHHNGMSVVIICAQADAEDHCMQLRGNGLLSSIEPAGDGC* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1975 156 Gene3D - 73 151 IPR014719 -
Mtr5g1975 156 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 59 153 IPR022935 GO:0006508
Mtr5g1975 156 Pfam ATP-dependent Clp protease adaptor protein ClpS 75 142 IPR003769 GO:0030163
Mtr5g1975 156 PANTHER BNAA07G24510D PROTEIN 1 156 - -
Mtr5g1975 156 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 156 IPR022935 GO:0006508
Mtr5g1975 156 SUPERFAMILY ClpS-like 73 150 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1975 Mtr-Chr5 24607376 24611400 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1975 5 24607376 24611400 Mtr5g1975 5 24607376 24611400 ECH