Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1959 ATGGCGCTCACTGCTTCGCTCGGACACTCTGCATTTCTCCAACTCTCTACTTCCTTTTATGGCGACACATCACCTTCTTCTTCAATTTCTACTACGTTTCCCGGAAACCAATCATTTTCAAGAAAACAATTTGTGGTTTTTGCTCGGAAGATGTCAGGATTGGAGGAGGCCAGAAGAATCAAGAGAGAACGTGAACTTCAGGTTGTGAAGAAGGATAGAAAAGGGCCTCCATTAAGGCGTGGAAAAGTATCGCCACGGCTACCTGTCCCTGATGATATACTAAAGCCTCCTTATGTAGGCTCAGATATACTTCCAGAAATGGGAACTGAATATCAAATTCATGATTCTGAAGGTATAGCTAAAATGAGGGCTGCAGGTGAGCTTGCAGCACGTGTCTTGAACTTCGCTGGAACTTTGGTTAGGCCTTCTGTAACAACTAATGAAATTGATAAAGCAGTGCACCAGATGATAATTGATGCTGGTGCTTATCCCTCACCCCTTGGTTATGGTGGATTTCCGAAAAGTGTATGCACATCAGTTAATGAGTGCATGTGCCATGGGATACCTGATTCTCGGCAGTTACAGAATGGTGATATTATCAACATTGATGTGACAGTCTACCTGAATGGATATCATGGAGACACGTCAAAGACTTTTTTTTGTGGGGATGTCAGTGATGCAATTAAAAACCTTGTTAAGGTAACTGAAGAGTGCTTGGAGAAAGGAATAGCCGTTTGCAAAGATGGTACCCCTTTTAAGAAAATTGGAAAAAGAATCAGTGAGCATGCCGAAAAGTATGGCTACGGTGTAGTGGAGCGTTTTGTTGGGCATGGTGTTGGAACAGTGTTTCACTGTGAGCCATATATTTATCATCATCGCAATGACGAAGGAGGTTGCATGGTTGAAGGTCAAACATTTACAATTGAGCCTATTCTTTCAATGGGAAGCACTGATTGCATTACATGGCCAGATAACTGGACAACAGTTACAACTGATGGCAGTCCGGCCGCACAGTTTGAGCATACCATTCTGATAACTAGAACTGGAGCTGAAATTTTGACTACATGTTGA 1071 0.4267 MALTASLGHSAFLQLSTSFYGDTSPSSSISTTFPGNQSFSRKQFVVFARKMSGLEEARRIKRERELQVVKKDRKGPPLRRGKVSPRLPVPDDILKPPYVGSDILPEMGTEYQIHDSEGIAKMRAAGELAARVLNFAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKTFFCGDVSDAIKNLVKVTEECLEKGIAVCKDGTPFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHCEPYIYHHRNDEGGCMVEGQTFTIEPILSMGSTDCITWPDNWTTVTTDGSPAAQFEHTILITRTGAEILTTC* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1959 356 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 274 292 IPR002467 GO:0006508|GO:0070006
Mtr5g1959 356 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 113 355 IPR002467 GO:0006508|GO:0070006
Mtr5g1959 356 Hamap Methionine aminopeptidase [map]. 111 356 IPR002467 GO:0006508|GO:0070006
Mtr5g1959 356 CDD MetAP1 119 354 IPR002467 GO:0006508|GO:0070006
Mtr5g1959 356 PRINTS Methionine aminopeptidase-1 signature 176 189 IPR001714 -
Mtr5g1959 356 PRINTS Methionine aminopeptidase-1 signature 198 214 IPR001714 -
Mtr5g1959 356 PRINTS Methionine aminopeptidase-1 signature 268 280 IPR001714 -
Mtr5g1959 356 PRINTS Methionine aminopeptidase-1 signature 298 310 IPR001714 -
Mtr5g1959 356 PANTHER METHIONINE AMINOPEPTIDASE 28 355 - -
Mtr5g1959 356 SUPERFAMILY Creatinase/aminopeptidase 76 355 IPR036005 -
Mtr5g1959 356 Pfam Metallopeptidase family M24 121 346 IPR000994 -
Mtr5g1959 356 PANTHER METHIONINE AMINOPEPTIDASE 28 355 - -
Mtr5g1959 356 Gene3D Creatinase/methionine aminopeptidase superfamily 76 356 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1959 Mtr-Chr5 24252915 24263848 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1959 5 24252915 24263848 Mtr5g1959 5 24252915 24263848 ECH