Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr5g1788 | ATGTCTCCAGAATTTCATCTTCTTCTTTTCCCTGACCTTGTTTACTTTCATCCATTCACTCTCACTTTCCAAACTGCACTTTGCTTCTTTCTCTTTGTTCTTGCTTTCCTTTTCTGGCTTACACCAGGTGGGTTTGCTTGGGCTTTATACAATAAAGCTTCATCTTCTGCCAAGTCTGTTATTCCAGGCCCATCTTTTTCTGGTTTGTTTGGTATTCTCTCAGGTCAAACACCACACCGTGTTTTAGCCAAACTAGCCAAGAGTCACCGTGCTGAGTCGTTGATGGCTTTTTCTGTTGGTTTAACCCGGTTCATTATTTCAAGTGAACCAGAAACTGCTAAAGAGATTCTTTGCAGTTCTGCTTTTGGTGATAGACCAGTGAAAGAATCAGCTTACGAGCTTTTGTTTCATAGGGCAATGGGGTTTGCTCCGTATGGAGAGTACTGGAGGAATTTGAGGAGGATTTCTTCAACCCATTTGTTTTGTCCTAGGAGGATTAATGGGTTTGAAGGTTTTAGGAGTGAGGTTGGTTTGAAAATGGTGGAGAGGATTAAGTTTTTGATGGGTGATATGGGTAGTGTTGAGGTGAAAAAAGTTCTTCATTTTGGTTCACTTAATAATGTGATGATGACTGTGTTTGGAAAATGTTATGATTTCTTTGATGGTGATGGTGTTGAGCTTGAGGAGTTGGTGAGTGAAGGGTATGAGCTGTTGGGTGTTTTTAACTGGAGTGATCATTTTCCTCTTCTGGGTTGGTTGGATTTGCAGGGTGTTAAGAAAAGGTGTAGAGCTTTGGTGACAAAGGTTAATACTTTTGTTGGAAAGATAATAGAGGAGCATAAGATGAAGAGAATGTCTGAAGGAAGGGCTATAGTTGGTGATTTTGTTGACGTTTTGCTTGATTTGGAGGAAAAAGACAAGCTCAGTGATTCTGATATGATTGCAGTTCTTTGGGAAATGATTTTCAGAGGAACAGACACAGTAGCAATATTACTAGAATGGATTCTGGCTAGGATGGTGCTTCATCCAGAGATACAAGCAAAAGCACAAGAAGAAATTTACCGTGTTGTTGGAAATTCCAAAGTTATCACTGATGCTGATGTTCAAAAAATGTGTTACTTACAGTGCATTGTGAAGGAAGCATTAAGAGTGCATCCACCAGGACCACTTTTATCATGGGCACGTTTAGCTGTTCATGATGTTATGGTTGGTGACAAGCATATTCCGAAAGGTACAACTGCTATGGTGAATATGTGGGCCATAACACATGATGAGAAGGTGTGGAATGAACCAGAAGAGTTTAAGCCAGAGAGGTTTATGAATGAGGATGTGAGTATAATGGGATCTGATTTGAGGTTAGCACCATTTGGAGCTGGTAGGAGGGTTTGTCCTGGAAAAGCTATGGGTTTGGCTTCTGTTCATCTTTGGTTTGCTCAGTTGCTTCACAACTTCAAATGGGTTTCATGTGATGATTCACTTGTTGATTTGGATGAATGTCTTAAGCTTTCTATGGAGATGAAAAAACCACTTGTGTGCAAGGTTGTTCCAATTCCAAGGACCTAG | 1563 | 0.4044 | MSPEFHLLLFPDLVYFHPFTLTFQTALCFFLFVLAFLFWLTPGGFAWALYNKASSSAKSVIPGPSFSGLFGILSGQTPHRVLAKLAKSHRAESLMAFSVGLTRFIISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRSEVGLKMVERIKFLMGDMGSVEVKKVLHFGSLNNVMMTVFGKCYDFFDGDGVELEELVSEGYELLGVFNWSDHFPLLGWLDLQGVKKRCRALVTKVNTFVGKIIEEHKMKRMSEGRAIVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQEEIYRVVGNSKVITDADVQKMCYLQCIVKEALRVHPPGPLLSWARLAVHDVMVGDKHIPKGTTAMVNMWAITHDEKVWNEPEEFKPERFMNEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASVHLWFAQLLHNFKWVSCDDSLVDLDECLKLSMEMKKPLVCKVVPIPRT* | 521 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr5g1788 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506|GO:0016705 | |
| Mtr5g1788 | 520 | PANTHER | CYTOCHROME P450 78A5 | 1 | 516 | - | - | |
| Mtr5g1788 | 520 | PANTHER | CYTOCHROME P450 78A7-RELATED | 1 | 516 | - | - | |
| Mtr5g1788 | 520 | Gene3D | Cytochrome P450 | 48 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | Pfam | Cytochrome P450 | 69 | 498 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 375 | 393 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 417 | 441 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr5g1788 | 520 | SUPERFAMILY | Cytochrome P450 | 61 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr5g1788 | Mtr-Chr5 | 19781630 | 19783738 | Transposed |
Event-related genes