Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1777 ATGGCGAAAAAACTTATGAAGTTGAATGTTGTTCCAAATAGAACAAGATCATTCTCCTCTGAAACTCCATCTCTTTACTCATTTCTTCAACCTTCTTTATTCAAATTTAATCTCCATAATGATAATGATAATGATAATGAACCCCATAATCTCCCAACTTCACCACCCCAATCACTCTCTCTTACACATCAACAACTCACCACTCTTCAAACAACTCTCCACAAATCCCTTATCACTTCTCAAACCGACGAAGCTTGGAAATCTTTCAAAACCCTAACAACCCATCATTCCTTCCCACCTAAACCCCTCACTAATTCCCTTCTCACCCACTTATCCTCTCTTCCTGACAACATTCTCAATCTCAAAAGAGCTTTCGCTTCAACCCTCTTTCTCATTCAAAAACACCCCAACCTCCTCGAATTCAATACAATTCATGCCATCCTTCTTTCCATTAAATCTGCCAACACTGCTCCCCCTGCTTTTTCACTTGTCAGATCAATGTTCAAATATCGTTTTTTCATTCCTTTTCATTTGTGGGGCGGCGTGCTCGTTGATATTGCTAGAAACAATGACAACCTTGCTGCCTTTTTACCTCTTTTTGAAGAAAACTGCAGGGTTGCTTTCGATGAGAAACTGGAGTTTATGATACCTGATGTTGCTTCTTGTAATGCTGCTCTTGAAGCCTGCTGTTTTTGCCTTCAATCGGTAACTGATGCTAACAGAGTTGTTGAAATTATGTCCAAGCTCGGTGTTAAGCCTGATGTGTTTAGTTTTGGATTTCTTGCTTATTTATATGCACTTAAAGGGTTACAAGATAAGATAGACGAGTTAAAAGTTTTGATGGTTGGTTTTGGCTACTCCAAAAACAATAAATGTTTTTATTCTAATTTGATTAGTGGCTATGTTAAGTCTGCTAATTTAGTTTCTGTAGAGTCGACAATTCTTAGCAGTTTGAATGATAGAGATGATGAGGGGGAAGTTTGGAGTTTTGATAGAGACACTTTTTGTTTAGTAGTTAAGGAATATCTTCATAAGGGAAATATTAAGGGTTTAGCTAATTTGATTATCGAAGCTCAAAAATTAGAGTCTTCGAATATCAAAGTTGACGAGTCTATAGGTTTTGGTATTGTTAATGCTTGTGTTAGTATTGGATTATCAGACAAAGCGCATAATATTCTTGATGAGATGAATGCTTTGGGAGGCTCTGTGGGTCTTGGGGTCTATGTGCCGATCTTGAAGGCTTACTGCAAAGAGAATCGAACTGCGGAGGCTAGTCTATTGGTGACCGAGATTAGTAGTTCAGGTCTAAAGTTGGACGTGGAAACCTATGATGCTCTGATAGAAACATCCATGTCCGGTCAAGACTTTCAGTCGGTCTTTTCTCTGTTTAGGGACATGAGAGGGGCGAGGGTTCTTGATTTGAAAGGGAGTTACTTGACTATAATGACAGGTTTGATGGAGAATCATCGACCTGAATTGATGGCAGCTTTCTTAGATGAGGTGGTTGAGGATCCTCGTATTGAAGTGGGTACTCATGATTGGAATTCTATAATCCACGCTTTTTGTAAAGCCGGGAGGCTAGAAGATGCAAGGAGAACTTTTAGAAGGATGACATTCCTGCAATTTGAGCCGAATGACCAAACATACTTGTCCCTGATTAACGGATATGTTTCGGCAGAAAAATATTTTGATGTAATGATGTTGTGGAATGAGGTTAAGCGAAAGTTAGCAGGGGATGGGCCGAAGGGGATCAAATTTGACCAGAATCTGGTTGATGCATTCTTGTATGCTATGGTCAAGGGAGGTTTCTTTGATGCTGTGATGCAAGTTGTGGAGAAATCTAAAGAGATGAAAATATTTGTTGATAAGTGGAGATACAAGCAAGCGTTCATGGAGACACATAAAAAGCTCAAAGTGGCCAGGTTAAGGAAAAAGAATGTCAGAAAAATGGAAGCGCTTATTGCTTTTAAGAATTGGGCTGGCTTAAATGCATGA 1995 0.392 MAKKLMKLNVVPNRTRSFSSETPSLYSFLQPSLFKFNLHNDNDNDNEPHNLPTSPPQSLSLTHQQLTTLQTTLHKSLITSQTDEAWKSFKTLTTHHSFPPKPLTNSLLTHLSSLPDNILNLKRAFASTLFLIQKHPNLLEFNTIHAILLSIKSANTAPPAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDNLAAFLPLFEENCRVAFDEKLEFMIPDVASCNAALEACCFCLQSVTDANRVVEIMSKLGVKPDVFSFGFLAYLYALKGLQDKIDELKVLMVGFGYSKNNKCFYSNLISGYVKSANLVSVESTILSSLNDRDDEGEVWSFDRDTFCLVVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHNILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSGLKLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1777 664 Gene3D Tetratricopeptide repeat domain 189 324 IPR011990 GO:0005515
Mtr5g1777 664 Gene3D Tetratricopeptide repeat domain 472 632 IPR011990 GO:0005515
Mtr5g1777 664 Pfam PPR repeat family 514 557 IPR002885 -
Mtr5g1777 664 PANTHER OS01G0788900 PROTEIN 1 664 - -
Mtr5g1777 664 TIGRFAM PPR: pentatricopeptide repeat domain 514 545 IPR002885 -
Mtr5g1777 664 MobiDBLite consensus disorder prediction 39 59 - -
Mtr5g1777 664 Gene3D Tetratricopeptide repeat domain 334 471 IPR011990 GO:0005515
Mtr5g1777 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Mtr5g1777 664 PANTHER BNAC05G43320D PROTEIN 1 664 - -
Mtr5g1777 664 Pfam Pentacotripeptide-repeat region of PRORP 359 468 IPR033443 -
Mtr5g1777 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 253 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1777 Mtr-Chr5 19626112 19631430 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1777 5 19626112 19631430 Mtr5g1777 5 19626112 19631430 ECH