Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1736 ATGGAAGACAAAGACAGAGCACCTACCGAAGAGTTTGTCGGCAACTCAAACTGGAATCTCGGCGTCGATGATTCCGGTGATAGGTTCGGCCACATCGGCTGGAATCTTGTACCGGAAACCACCGATGACAAACTGTTGCAACGGGTTCAAACCGGTTCTATCGAAACGGCATCAGTGTCGGCGTCAGCGTCGTCTTACAGGTCAAATAATCAATCAATTTCTTCAAGCTCCAGCGAGGATCTGCCGGAGAAATCCACCGTCTCCGATGAGAAACCGCCGGAAACACCGAGTAAAAGTAAGAAGAAGGGGGAAAAGCGAATAAGGCAACCAAGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAAGATGGGTACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCATTCCCTAGGAGCTACTATAGGTGCACAAATAGTAAATGCACGGTGAAGAAAAGGGTTGAACGCTCTCATGAGGACCCAACAATTGTTATAACTACATATGAAGGCCAACATTGTCATCACACTGTTGGATTTCCTCGAACTGGAATGATTAGTCATGAATCTTCTTTTACTAGCCAGTTTGCTCCTACAATGCCTCAATTCTATTATCCTGTTCAATTACCTACAGAATTAAACACTTGCACCACTACTGTTTCTCAGCTATGTCAAACACATGATCATCATGAGTCTGCTGGAGGATCGAGCAGCGCTACAATGCTGGCCGATGCATCACCGCCGCTGGATCTAGCCGATGAAGGATTACTTGGAGATATTGTACCCCGTGGAATGCGCAACAGGGATGAGAGAAATATTTGA 837 0.4552 MEDKDRAPTEEFVGNSNWNLGVDDSGDRFGHIGWNLVPETTDDKLLQRVQTGSIETASVSASASSYRSNNQSISSSSSEDLPEKSTVSDEKPPETPSKSKKKGEKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSHEDPTIVITTYEGQHCHHTVGFPRTGMISHESSFTSQFAPTMPQFYYPVQLPTELNTCTTTVSQLCQTHDHHESAGGSSSATMLADASPPLDLADEGLLGDIVPRGMRNRDERNI* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1736 278 MobiDBLite consensus disorder prediction 1 24 - -
Mtr5g1736 278 MobiDBLite consensus disorder prediction 55 111 - -
Mtr5g1736 278 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 8 197 IPR044810 GO:0003700
Mtr5g1736 278 MobiDBLite consensus disorder prediction 83 101 - -
Mtr5g1736 278 SMART WRKY_cls 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1736 278 Gene3D WRKY domain 110 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g1736 278 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 8 197 - -
Mtr5g1736 278 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1736 278 SUPERFAMILY WRKY DNA-binding domain 115 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g1736 278 MobiDBLite consensus disorder prediction 55 82 - -
Mtr5g1736 278 ProSiteProfiles WRKY domain profile. 118 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1736 Mtr-Chr5 19194159 19205564 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g1736 WRKY 3.5e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1736 5 19194159 19205564 Mtr5g1736 5 19194159 19205564 ECH