Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1730 ATGGATGTGAAAGCTCTCTTTTACATTCTTCTTTTATTGTTTACCATATCTTCAGCAGAAGATGTGCTGCTTAATGTAAAAGGGGTTACTAACATTGCTACCACAGATAATAATTTTATATGTGCAACTTTAGATTGGTGGCCTGAAAATAAATGTGATTATAACCAATGTCCATGGGGAAAAGCTGGCATTCTCAATCTGGACTTGGGTAACAGAATTCTATCAAATGCTGTCAAGGCATTTAATCCTTTGAGAATCAGACTAGGAGGATCATTGCAAGATCAAATTATTTATCAATTTGGGTCTCACATAAAGCGTTGCCCTAATATGATCAAGATAGCTGGTGGTTTGTTTGGATTCAGTAAAGGCTGCCTTCCCCAAAATCGATGGGATCAAGTAAACGACTTTTTTAACAAAAATGGAGTGAAATTAACTTTTGGGCTAAATGCCCTAATTGGAAAGAATATTTCCAAGGTGGACAATAAGAGTTTTTTGGGAGATTGGAGACCAGCCAATGCCATAAGTCTCATGAAATACACAATTTCAAAAGGATACAAAATAGATTCATATGAATTAGGGAATGAGCTATGTGGTGAAGGGATAGGTGCAAGAGTAGACAGTGTTCAATATGCTAAAGATATTACTAAGCTAAGATCTATAGTTAATAGATTATACCCAGATGTGACTACAAGACCAAAAGTGGTAGGCCCTGCTGGTTTCTATGATAGGGAATGGTTTGATACATTTTTACATAATGTTAGACCTGGTGTGGTTGATGGAGTCACTCATCACATTTATAACCTTGGTGCTGGTGTTGATAAAGAACTCATCAATAGAGTTCAAGACCCTTATTTTTTAAGTCAAATTGGTCAAACTTTCAAAGATGTAGCAGTAACAGTCAGGCAATACACACCAAGGGCAGGAGCATGGGTTGGGGAAGCTGGTGGAGCTTATAATAGTGGTGGAAAAGATGTGTCACACACTTTTGTTAATGGCTTTTGGTACTTGGACCAACTAGGCATGACAGCAACCATGAACCATAAGGTTTATTGTAGACAAACTCTTATTGGAGGAAATTATGGTTTGCTAAACACCACATCTTTTATTCCTAACCCTGATTATTATGGAGCTCTTTTGTTTAATCGACTAATGGGACCCAAAGTGCTCTCTATTTCTCATGAAGCATCTCATTATTTGCGTACATATGCTCATTGTTCTAAGAATGGGCCTGGTATCACTGTGCTGATCATCAACATGGCAAAAACCATTTTCAATCTTTCAATAATGAATGACATGAATAAACAAATGAGGGAAGAGTATCATTTGACACCAAAAGATGGAAACATTCAAAGTGATGTGGTGTTGTTGAATGGAACACCATTGATGCTTACTCGGTCATTGGACATTCCACTATTGAAACCAGTATTGGTTTCTTCATCTTCTCCAATCAAAGTGGATCCTCAATCCATAGTGTTTGTGCAACTCAAAGGCTTCAATGCACCGGCATGTGTGTAA 1515 0.3749 MDVKALFYILLLLFTISSAEDVLLNVKGVTNIATTDNNFICATLDWWPENKCDYNQCPWGKAGILNLDLGNRILSNAVKAFNPLRIRLGGSLQDQIIYQFGSHIKRCPNMIKIAGGLFGFSKGCLPQNRWDQVNDFFNKNGVKLTFGLNALIGKNISKVDNKSFLGDWRPANAISLMKYTISKGYKIDSYELGNELCGEGIGARVDSVQYAKDITKLRSIVNRLYPDVTTRPKVVGPAGFYDREWFDTFLHNVRPGVVDGVTHHIYNLGAGVDKELINRVQDPYFLSQIGQTFKDVAVTVRQYTPRAGAWVGEAGGAYNSGGKDVSHTFVNGFWYLDQLGMTATMNHKVYCRQTLIGGNYGLLNTTSFIPNPDYYGALLFNRLMGPKVLSISHEASHYLRTYAHCSKNGPGITVLIINMAKTIFNLSIMNDMNKQMREEYHLTPKDGNIQSDVVLLNGTPLMLTRSLDIPLLKPVLVSSSSPIKVDPQSIVFVQLKGFNAPACV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1730 504 Pfam Glycosyl hydrolase family 79, N-terminal domain 23 340 IPR005199 GO:0016020|GO:0016798
Mtr5g1730 504 PANTHER HEPARANASE-RELATED 10 503 - -
Mtr5g1730 504 Gene3D Glycosidases 61 382 - -
Mtr5g1730 504 PANTHER OS07G0598400 PROTEIN 10 503 - -
Mtr5g1730 504 SUPERFAMILY (Trans)glycosidases 35 384 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1730 Mtr-Chr5 19137651 19141808 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1730 5 19137651 19141808 Mtr5g1730 5 19137651 19141808 ECH