Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1717 ATGGTGCAAGGTGTGTCATTGAGCACACTAGCAACCTGTGGAAAGAGCAGAATCTATGGTTCACCCTTTGAGCCATTTAAACAATCACATATTACATCTTCCACTGGAAAACACTTGGTTTGGAACAAGTGTGTGAAGAGTTTAGTCTTTATTGGGTACCCTTTTGCGTCGAGGCAAAGAAGTGGTTTTAAGGTAGAAGCTGGATGGATGTTTAGAGGTGGAGAACAAGAGTTGGATGCAAGTGTAGAGCAGAGTGAAAGTGCGAACGAAGATATCTTGATGTTCTTTTTTCAACTGGATTTAGCAACAAGAGTGCAGTGTGCTTTAAACATGGAAGAGTATGACATTGCAAAGCAGCTGCGAAACAAACTTACCGAGGTTGAAGAAGAGGTAATTAAGCAAAAACAATCAAAAAGGGGAATGTCTTCAAAAAGTGAAGCTCAAGATAAAGCTCTAAGTGTTATACGTCTTCGTTCAGATCTTCAGAGTGCTATCGAGAATGAAGATTATGCCTTGGCTGCTAAATTACGTGATGAAATTTCCAAACTTGAAGCAGAGTCTCTTGCTGCATCAGCTAAAGCTTTGGCACATGAAAATGCACAATATGTCTTCCGCTTGGGGCAGAAAGTAAAGCATAAAATGTTTGGCTATAGAGCTATAATCGTAGGAATGGATCCAGTATGCAGTGAATCAAGTTCATGGATGGAAAATGCACAAGTTAAGAAGTTGTCGCGTGGTACCGCTCAACCGTTTTATCAGGTTCTTGTTGATGTGCGTGCTGAGCCAGATCTACTGGTGGCATATGTTGCAGAGGAAAATCTTTTAGTACCTGACAAAGCAGACAAAGGAAGATTTGATCACCCCTACATGTCTTTTCTGTTCTATGGAATGGATTCAGCTGGAGATTTCATCCCTATTAAGCAACTTCGGGAGAAGTACAATAAACCGCGCCATGAAATACCCTTTGACCCACCAACCGATGAAGATAGTGGAAAATCTTAA 1002 0.4102 MVQGVSLSTLATCGKSRIYGSPFEPFKQSHITSSTGKHLVWNKCVKSLVFIGYPFASRQRSGFKVEAGWMFRGGEQELDASVEQSESANEDILMFFFQLDLATRVQCALNMEEYDIAKQLRNKLTEVEEEVIKQKQSKRGMSSKSEAQDKALSVIRLRSDLQSAIENEDYALAAKLRDEISKLEAESLAASAKALAHENAQYVFRLGQKVKHKMFGYRAIIVGMDPVCSESSSWMENAQVKKLSRGTAQPFYQVLVDVRAEPDLLVAYVAEENLLVPDKADKGRFDHPYMSFLFYGMDSAGDFIPIKQLREKYNKPRHEIPFDPPTDEDSGKS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1717 333 TIGRFAM yccV: hemimethylated DNA binding domain 202 303 IPR011722 GO:0003677
Mtr5g1717 333 PANTHER SI:DKEY-261L7.2 82 328 - -
Mtr5g1717 333 SUPERFAMILY YccV-like 203 299 IPR036623 GO:0003677
Mtr5g1717 333 SMART YccV_like_2_a 201 305 IPR011722 GO:0003677
Mtr5g1717 333 Coils Coil 110 137 - -
Mtr5g1717 333 Coils Coil 173 193 - -
Mtr5g1717 333 Gene3D - 200 303 IPR036623 GO:0003677
Mtr5g1717 333 Pfam UvrB/uvrC motif 155 185 IPR001943 GO:0005515
Mtr5g1717 333 Pfam Hemimethylated DNA-binding protein YccV like 204 300 IPR011722 GO:0003677
Mtr5g1717 333 PANTHER SI:DKEY-261L7.2 82 328 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1717 5 19036823 19041415 Mtr5g1717 5 19036823 19041415 ECH