Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1651 ATGACTAATGATTCAACCATGAAGCTTTTCGGGAGAACCATTTTTCAAAAACACAACACCGATGTTCCTACCAATGATTCTTCCTCAGAATTTTCTCCTCATCTTGCTCATGAAGATTTCTCTGATCATAGTCTTCATTCATCTTTATCTTCATCTTCTCCACTTGAAGAGAATTCTTCAAACGAACATGATTCAAAGAGATATAAGGAACAATCAAGGAAAGAACCCACCTCAGTACTTGATTATGAAGAAGCCTCAAAACAAACCACAGAGGATTTAAACATTCCCACCACATCAGAAACAGAAACTTCTCTACAAAATTCCACTAAAATTGATGAACAAAGTGATATGTCCCAGGACAAAGCTCCTAACAAAATTCTTCCATGTCCAAGATGCAAAAGCATGGACACAAAATTTTGTTACTACAATAATTACAACGCCAACCAGCCCCGTCACTTCTGCAAAAACTGTCAGAGATATTGGACTTCCGGAGGAACCACGAGAAGCATGCTTGTAGGTGCAGGTCGCCGTAAGAACAAAATCTCTTCCTTATCTTCCGATGCCTCACATAATTGTCAAATGAGTACTGTCTTGACCTTTGGATCAGATTCTCCTAATATGTCTTCAACTTCACTTGCCAAGAAAATGAATGTTGGATCAGATAATGAAACATTTGATAAGAGTAATCAGTGTTTTTTTCCTCAACAGTTTCCATGGAACCCAGCAATGTGTTATCCTGTGTCATTCCAACCCAATATAGCATACTATGGTGGTTGTTTAGTCCCATCATGGAGCGTACAACCTATTACAACTCAATCTTGTGTTCCAAGTAAACCTACTTTAGGGAAACATTCAAGAGATGGCTTAGAAAATAACAACAAAGAAAGTGATAATAATAGTGTGTTGATTCCCAAGACATTGAGAATTGAAGACCCTATTGAGGCTTCAAAGGGTTCTAATTGGTTAACACTAGGAATCAAGAATGGTGGAGGACTTTTCAATGGATTTGCATCTATGGTTGGTGATAGGAATCATGTGGTTGAAGCAGACTCATCAGTATTGAAAGCCAATCCTGCAGCTTTATCAAGGTCTTTTGTGTTCCGCGAGATGATTTGA 1116 0.3826 MTNDSTMKLFGRTIFQKHNTDVPTNDSSSEFSPHLAHEDFSDHSLHSSLSSSSPLEENSSNEHDSKRYKEQSRKEPTSVLDYEEASKQTTEDLNIPTTSETETSLQNSTKIDEQSDMSQDKAPNKILPCPRCKSMDTKFCYYNNYNANQPRHFCKNCQRYWTSGGTTRSMLVGAGRRKNKISSLSSDASHNCQMSTVLTFGSDSPNMSSTSLAKKMNVGSDNETFDKSNQCFFPQQFPWNPAMCYPVSFQPNIAYYGGCLVPSWSVQPITTQSCVPSKPTLGKHSRDGLENNNKESDNNSVLIPKTLRIEDPIEASKGSNWLTLGIKNGGGLFNGFASMVGDRNHVVEADSSVLKANPAALSRSFVFREMI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1651 371 MobiDBLite consensus disorder prediction 59 88 - -
Mtr5g1651 371 MobiDBLite consensus disorder prediction 277 299 - -
Mtr5g1651 371 PANTHER CYCLIC DOF FACTOR 1 2 195 - -
Mtr5g1651 371 PANTHER CYCLIC DOF FACTOR 1 192 370 - -
Mtr5g1651 371 ProSitePatterns Zinc finger Dof-type signature. 129 165 IPR003851 GO:0003677|GO:0006355
Mtr5g1651 371 PANTHER CYCLIC DOF FACTOR 2 2 195 IPR045174 GO:0003700|GO:0006355
Mtr5g1651 371 PANTHER CYCLIC DOF FACTOR 2 192 370 IPR045174 GO:0003700|GO:0006355
Mtr5g1651 371 ProSiteProfiles Zinc finger Dof-type profile. 127 181 IPR003851 GO:0003677|GO:0006355
Mtr5g1651 371 MobiDBLite consensus disorder prediction 89 113 - -
Mtr5g1651 371 MobiDBLite consensus disorder prediction 15 31 - -
Mtr5g1651 371 Pfam Dof domain, zinc finger 125 180 IPR003851 GO:0003677|GO:0006355
Mtr5g1651 371 MobiDBLite consensus disorder prediction 15 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1651 Mtr-Chr5 18112133 18113835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1651 95 371 C2C2-Dof Transcription Factor Family AT5G62430 46.233 1.82e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr5g1651 zf-Dof 3.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1651 - - mtr:MTR_5g041530 446.047