Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3938 ATGATTAAGATGATGAAGAGAGCCATTGCAATTAGGAATTCAACGGCCAATGATACTGGTGGAAATAATAAGATCTCTCTCTCACCCTCAGATTTGGAAACTGTCACCGACAAATATGCAACCTCTTCTCCTCCTCTGACTTTGATGCGTGTGATGGGTTTCTTCGTCATTTCCTTCATGCTCTTTTCCGTTCTCTTCTCACTCTCCGTTGTTCTTCGAGACCCTCCCTCTGATGCCGCTTTCCGTGAACAACCTTCATCTCTCTTCCAACTTCAACAAACACAACAAGGTTTGGACAGTGATGCCTCTCATTCCGGTGAGTTGCTAAACGATAAACTGCTTGGTGGTCTTCTAGCTGATGGATTCGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGCTATTTTCCACAAAGGACTATCAGGAAAGCCTTCTTCTTACCTTATTTCTAGATTGAAAAAATATGAAGCTCGACACAAACTATGTGGACCTTATACCGAGTCTTATAACAAAACAGTGAAACAACTCGGCTCTGGTCAATTTACTGAGTCCTTGGATTGTAAATATGTAGTATGGATTTCATTTAGTGGGTTGGGGAATAGGATATTGACCCTAGCTTCAGCATTTCTTTACGCTCTCCTCACAGACCGTGTTCTACTTGTTGATCCTGGAGTGGATATGACCGATCTCTTTTGTGAACCATTTCCGGATGCTTCATGGTTTGTCCCTCATGATTTTCCTCTTAACAGTCAATTGAATAGTTTCAACCAGGACTCGAATCAATGTCATGGGAAAAAGCTGAAAACGAAATCAATTACAAATTCTACTGTGCCATCTTTTGTTTATCTTCATCTAGCCCATGATTATGATGATCATGATAAGCTTTTCTTTTGTGATGAAGAGCAACTTTTTCTGCAGAAAGTACCTTGGTTAATTATGAAAACAGATAATTATTTTGTCCCATCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTGAATGATCTATTCCCAAAAAAGGAAAATGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTTTGGGGACTTGTTGTCAGATACTATAATGCATATTTAGCTAAAGCTGATGAAAGAGTAGGCATACAAATCAGAGTGTTTGACACCGAACCAGGTCCGTTTCAACATGTATTGGATCAGATCTTAGCTTGTACATTGAAGGAGAATATTTTGCCCGATGTTAACCGCGGGCAGAATATTAATAGTTCATTAGGAACACTAAAGTCAAAAGCTGTACTAATGACATCCTTAAGCTCTGGTTATTTTGAAAGGGTAAGAGACATGTATTGGGAATATCCTACTATGACAGGAGAGGTGGTTGGAATTTACCAGCCAAGCCATGAAGGATATCAACAAACACAGAAGCAGTTTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTAATGTGTTAGTTACTAGCTCATGGTCTACTTTTGGCTATGTAGCTCAAGGGCTTGGAGGTTTAAAACCATGGATACTCTACAAACCGGAGAATCGAACGGCTCCAAATCCTCCTTGTCGACGTGCTATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCTAAGAGAGGAACCGACACCGGTGAACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1731 0.4067 MIKMMKRAIAIRNSTANDTGGNNKISLSPSDLETVTDKYATSSPPLTLMRVMGFFVISFMLFSVLFSLSVVLRDPPSDAAFREQPSSLFQLQQTQQGLDSDASHSGELLNDKLLGGLLADGFDEKSCLSRYQSAIFHKGLSGKPSSYLISRLKKYEARHKLCGPYTESYNKTVKQLGSGQFTESLDCKYVVWISFSGLGNRILTLASAFLYALLTDRVLLVDPGVDMTDLFCEPFPDASWFVPHDFPLNSQLNSFNQDSNQCHGKKLKTKSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQLFLQKVPWLIMKTDNYFVPSLFLMPSFEQELNDLFPKKENVFHFLGRYLFHPTNNVWGLVVRYYNAYLAKADERVGIQIRVFDTEPGPFQHVLDQILACTLKENILPDVNRGQNINSSLGTLKSKAVLMTSLSSGYFERVRDMYWEYPTMTGEVVGIYQPSHEGYQQTQKQFHNQKAWAEMYLLSLTNVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDN* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3938 576 Pfam Xyloglucan fucosyltransferase 88 547 IPR004938 GO:0008107|GO:0016020|GO:0042546
Mtr4g3938 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 38 576 IPR004938 GO:0008107|GO:0016020|GO:0042546
Mtr4g3938 576 Gene3D - 185 240 - -
Mtr4g3938 576 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 38 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3938 Mtr-Chr4 53148291 53150715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3938 6 574 Xyloglucan Fucosyltransferase1 AT2G03220 59.402 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3938 K13681 - gmx:100803305 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3938 4 53148291 53150715 Mtr4g3938 4 53148291 53150715 ECH