Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3344 ATGAGTGGAGGGAACAAGATGGTTACTGTATGGTTAATCACCGTTGCAGTAGTACTAGTAGCAAGTGTTGGAATAACAGTAACAGAAGCTCAACCAGAAGCAAACTTCAAGTGTCTAACAGAAAACGCTACGTGTCGTAGTTTAACCGACTACACCAGCACAAACTCAACAACCTTGAAGGAAATAGCTACCTTGTTCGGTGTAAAACACTTCCTAGACCTCCTTGGAGCTAACAACCTTCCAAGCAACACCAACAACAGTTACAAAGTTAATCCCAACCAAGTCATCAAGGTTCCATTCCCCTGCAAATGTAGTAACAGAACAGGTACTTCCAATCATGTACCTCGTTACAAGATTGTACCGGGTGATACCCTGGACGCAATAGCCAGGGTTAGATTTGCGGGTTTGGTTAAGTATCAACAGATCCAAACTGCTAATAAGATTCCAGATGCTAATAATATAACTGCTGGTGCTACCATTTGGATTCCTTTGCCTTGTAGCTGTGATCCGGTGGATGGTACCAGTGTGATGCATTATGCACATATTGTTCCAATGGGGAGTAGTATTCAATCTATTGCTCAACAATATGCTATTAGTCAACAGACTCTGCTGTCACTCAACGATCTTGATGACCCTAAAAACCTTCTAGCTGGTCAGCTTCTTGATGTTCCCCTTCCAGTTTGTAACTCGAGTATCAAAAGTGATTCATTGGATTTTCCATTACTTGTGCCGAATGCGACATATTTCTACACTGCACATGAATGTGTCAAATGTAAATGTGACTCTACTGGTGATAACAAAAACTTACAATGTGAGGCATCGAATCTAAAACCGATAAATAATTGGTCGGTTTGTCCGTCTCTGAAATGCTCTGGGAGTGTGTTGCTTGGGAACACTACATCCACAGATTCGTGTAGCCGTAGAGTTTGTGATTACACTGGTTATACTTCTTCTCGCAATATCTCTACCACTCTTGCTACTCAGAACACTTGTGCCGTGGCACCTAGTGGTTCCGGTGATTCAGGTTCAGGGGCATCTAGGAGCATGTTGAATGGCTGGGTTTTGAATAAGCTTCTAATTCTCATTCACTTTCTCATCTTATTTGTCTATCTTTTGTAG 1119 0.4191 MSGGNKMVTVWLITVAVVLVASVGITVTEAQPEANFKCLTENATCRSLTDYTSTNSTTLKEIATLFGVKHFLDLLGANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDTLDAIARVRFAGLVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVPMGSSIQSIAQQYAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVPNATYFYTAHECVKCKCDSTGDNKNLQCEASNLKPINNWSVCPSLKCSGSVLLGNTTSTDSCSRRVCDYTGYTSSRNISTTLATQNTCAVAPSGSGDSGSGASRSMLNGWVLNKLLILIHFLILFVYLL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3344 372 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 19 332 - -
Mtr4g3344 372 Pfam LysM domain 182 224 IPR018392 -
Mtr4g3344 372 Pfam LysM domain 117 163 IPR018392 -
Mtr4g3344 372 CDD LysM 186 223 IPR018392 -
Mtr4g3344 372 SUPERFAMILY LysM domain 179 225 IPR036779 -
Mtr4g3344 372 CDD LysM 117 162 IPR018392 -
Mtr4g3344 372 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Mtr4g3344 372 Gene3D LysM domain 178 234 IPR036779 -
Mtr4g3344 372 Gene3D LysM domain 115 170 IPR036779 -
Mtr4g3344 372 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Mtr4g3344 372 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 19 332 - -
Mtr4g3344 372 SUPERFAMILY LysM domain 116 164 IPR036779 -
Mtr4g3344 372 SMART LysM_2 116 163 IPR018392 -
Mtr4g3344 372 SMART LysM_2 50 99 IPR018392 -
Mtr4g3344 372 SMART LysM_2 180 224 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3344 13 324 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.860 6.69e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3344 - - cam:101506878 496.123