Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3005 ATGGGTTTGAGTTCTAAACAGGTTATTTCTAGCAGTGGACTTGATTGGAAACAAACCTTATTAGAATCTCAAGATTTGGAACTTCCAAAGCCTCATCATCTAATGAGAAAACAACAACAGCAACAAAGTCAGCAACAAGCAGAACATTTGAATTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAGTCTCAACCTCGTCACTTCTGTAGAGCTTGTAAAAGACACTGGACTAAAGGTGGAACTCTACGCAATGTTCCTGTTGGTGGTGGCAGAAAGAATAAGAGGATCAAGAAACCAACCACACCAGTTACTTCTTCCACCACCATAACTACTACTAGTACTACTTGCACCACCTCTATTACAAATATGAATAGCAACATGGCAATTCAAACTCCTCTTCAAGTTGGTGATCACAAAAGCATTCCTTCATCTCTATATCAAGCTCTAATTCATCCACCATCTTTGCTTCTACAACAGAATATGATGAATAACTTATCAGAAAACAAAGATTTTGGTATTGGTAATGGTAATGGTAATGTTAATGTTAATGGCATGTTTACTAGTACTAGTTCAACTTTGCACCTTCCTCATCAAAATCAAACCATGCTCTTTCCCTTTTCAACCTCAAGCTCTTTTGACACAACTACTTGTTCATCATCCAATGTTTATTACTATGGAGAGGATTTTAAAACAATAGAGGAACCAATAATTCCAAGCACTGGCTGCACTAACACAAAGCCATGGGAGATACCAGCAGCATCAACAAGTGGTGGCATGGAAAGTTCAAAGTATTGGAATTGGGAAGACATTGATTCATTGGTTTCAACTGATCTAAAGAATCCTTATTGGGATGATTCTGATATCAAACCTTGA 897 0.3712 MGLSSKQVISSSGLDWKQTLLESQDLELPKPHHLMRKQQQQQSQQQAEHLNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRIKKPTTPVTSSTTITTTSTTCTTSITNMNSNMAIQTPLQVGDHKSIPSSLYQALIHPPSLLLQQNMMNNLSENKDFGIGNGNGNVNVNGMFTSTSSTLHLPHQNQTMLFPFSTSSSFDTTTCSSSNVYYYGEDFKTIEEPIIPSTGCTNTKPWEIPAASTSGGMESSKYWNWEDIDSLVSTDLKNPYWDDSDIKP* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3005 298 MobiDBLite consensus disorder prediction 91 118 - -
Mtr4g3005 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 230 IPR045174 GO:0003700|GO:0006355
Mtr4g3005 298 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Mtr4g3005 298 PANTHER OS06G0284500 PROTEIN 37 230 - -
Mtr4g3005 298 Pfam Dof domain, zinc finger 49 102 IPR003851 GO:0003677|GO:0006355
Mtr4g3005 298 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3005 Mtr-Chr4 43659647 43661313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3005 50 107 C2C2-Dof Transcription Factor Family AT1G28310 81.356 4.18e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr4g3005 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3005 - - mtr:MTR_4g089095 557.755