Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2796 ATGTATATGGACATTATCTTTATCCTCTTCCTCATCTTTCTCTCATCTTTCCTCTCATATCCATTCATCAAGAAATACAATAAACACGAAACCATAGCCAAACCTAAACTTCCCCCAGGTTCATTGGGTTGGCCTTATATAGGAGAAACTTTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCTAAGCAAAAAAGATATGGAGAAATATTTAAGACACACATATTAGGATGTCCATGTGTGATGTTAACAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATACCCCAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTATTCTTTCACCAAGGAGATTACCACACTCGCATCAGAAAACTCGTTCAAAACTCTCTTGCTCCTGAATCAATCAAGAAATTGATCCCTGATATTGAAAATGAAGTCATTTCCTCATTAGAATCCTGGGTTTCTATTGGACAAGTCATCAACGCTTTCCATGAAATGAAAAAGTTCTCTTTCAATGTCGGGATCCTCTCTGTCTTTGGTAACTTGGAAGGCAATTATAGAGAACAGCTTAAGGAGAATTACTGCATAGTAGAGAAAGGTTACAATTCTTTCCCAAATAAGATACCCGGAACATCATACTCCAAAGCTCTTTTGGCGAGGCGGCGAATTCAAGAGATTATAAGTGAGATAATTTGCAAGAGAAAGGAGCAAAGATTGAATGAGAAGGATCTATTAGGCCATTTGTTAAACTACAAGGATGAAAAAGGGAAAATGTTAAGTGATGAGGAAGTTGCTGATAATGTGATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTCTTACTTGGATTCTCAAGTATCTTCATGATCACCAGAAACTTCTTGAAGCCATAAAAGCTGAGCAGATGGCAGTATGTGATACCAATGATGGAGGGAAGATTCCATTGACATGGGGTCAGATAAAAAATATGCCACTAACTCACAAGGTAATATTGGAAAGCCTAAGGATGTCAAGCATCATATCATTTACTTTTAGGGAAGCTGTGGTTGATGTAGTATACAAGGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCATAATTTTGACCCATCAAGATTTGAGTTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCATGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATCCATCATCTAGTAACCAAATTTAGGTGGGAGGTAGTGGGATATCAAAGTGGAATCCAATATAGCCCATTCCCAATCCCTCAGCAAGGTCTACCCACAAGATTTTGGAGAATCAAATAG 1416 0.3814 MYMDIIFILFLIFLSSFLSYPFIKKYNKHETIAKPKLPPGSLGWPYIGETFQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLTSPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGDYHTRIRKLVQNSLAPESIKKLIPDIENEVISSLESWVSIGQVINAFHEMKKFSFNVGILSVFGNLEGNYREQLKENYCIVEKGYNSFPNKIPGTSYSKALLARRRIQEIISEIICKRKEQRLNEKDLLGHLLNYKDEKGKMLSDEEVADNVIGVLFAAQDTTASVLTWILKYLHDHQKLLEAIKAEQMAVCDTNDGGKIPLTWGQIKNMPLTHKVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEFAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYQSGIQYSPFPIPQQGLPTRFWRIK* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2796 471 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 468 - -
Mtr4g2796 471 SUPERFAMILY Cytochrome P450 33 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 Gene3D Cytochrome P450 26 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PANTHER CYTOCHROME P450 26 8 468 - -
Mtr4g2796 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2796 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2796 Mtr-Chr4 41657163 41660135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2796 6 469 Cytochrome P450 AT3G19270 69.181 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2796 4 41657163 41660135 Mtr4g2796 4 41657163 41660135 ECH
Mtr1g0505 1 5916281 5920266 Mtr4g2796 4 41657163 41660135 ECH