Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2688 ATGCATTCTATGGCTTTTAGAATTATGATTAGTTTTGTTGTCACATTGGTGCTGCTAAGCTCAATATGTGATGCACAATTGTCTTCTACGTTTTACGATAGTACATGCCCTAATGCACTAAGCACTATCAGAACTGTGATTCGTACCGCTGTCTCTAAAGAGCGTCGTATGGCTGCATCTCTCATTCGTCTTCATTTTCATGATTGTTTTGTCCAGGGTTGTGATGCATCAATTTTGCTAGACGACACCTCCACAATTGAGAGTGAAAAGAGTGCACTTCCAAATATTAACTCTGTAAGAGGATTTGAAGTTATTGATAAAGCAAAAGCTAATGTGGAGAAAGTATGCCCTGGAGTTGTGTCTTGTGCTGACATCGTAGCAGTAGCAGCTCGTGATGCATCATTTGCTGTGGGTGGTCCGTCATGGACGGTAAAACTCGGAAGAAGAGACTCCACCGTTGCTAGCAAAAGTCAGGCCAATTCAGACCTTCCAAAATTTACGGATGATCTAACAACTCTTATAGCCCATTTTACCAATAAAGGTCTTACTCTCAAAGATATGGTTACTTTATCTGGTGCTCACACAATCGGACAAGCTCAATGCTTCACTTTTCGTGACAGGATATATAACAATGCAAGTGACATAGATGCTGGGTTTGCTAGCACTCGCCGACGTGGTTGTCCATCTTTAAGTTCCACCACAAACAATCAAAAGTTGGCAGCCCTGGACTTGGTTACACCAAATTCTTTTGATAACAACTACTTTAAAAATTTAATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTTTATTTGGTGGAGGAGGATCTACAGATTCTATCGTTTCTGAATACAGCAAAAATCCTACTACTTTTAAGTCAGACTTTGCTGCTGCTATGATAAAGATGGGAGATATCCAACCCTTAACCGGATCTGCTGGAATCATAAGAAGTATATGCAGTGCTATCAATTGA 975 0.4021 MHSMAFRIMISFVVTLVLLSSICDAQLSSTFYDSTCPNALSTIRTVIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDTSTIESEKSALPNINSVRGFEVIDKAKANVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTVASKSQANSDLPKFTDDLTTLIAHFTNKGLTLKDMVTLSGAHTIGQAQCFTFRDRIYNNASDIDAGFASTRRRGCPSLSSTTNNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFGGGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIQPLTGSAGIIRSICSAIN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2688 324 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Mtr4g2688 324 Gene3D Peroxidase, domain 2 164 303 - -
Mtr4g2688 324 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Mtr4g2688 324 Gene3D - 30 324 - -
Mtr4g2688 324 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Mtr4g2688 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PANTHER PEROXIDASE 7 323 - -
Mtr4g2688 324 Pfam Peroxidase 44 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2688 324 PANTHER PEROXIDASE 72-RELATED 7 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2688 Mtr-Chr4 40449088 40450722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2688 1 324 Peroxidase AT1G14550 68.923 5.36e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2688 K00430 - gmx:100786161 535.413