Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1052 ATGAATACTTTTTCTCATGTTCCCCCGGGTTTTAGGTTCCATCCCACAGATGAAGAACTTGTGGATTACTACCTTAGGAAGAAAATTGCTTCAAGAAGGATTGATCTTGATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTGAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAGTGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGTACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAATCAATCTATAGTAAGCATAATTTGATAGGAATGAGGAAAACATTGGTGTTTTATAAAGGTCGAGCTCCCAATGGACAAAAGTCAGATTGGATAATGCATGAGTATAGGCTTGAAACAGATGAAAATGGCACACCACAGGAAGAAGGATGGGTTGTATGTAGAGTATTCAAGAAAAGAGTAACAACAACAATTCGCAAAATGAGTGAGCATGACTCTCCTTGTTGGTATGAAGACCAAGTTTCATTCATGCAAGATATGGACTCACCAAATCAAACCTCTCAATCCAATTTAATTTACCAACAATTACCATCATATACTTGCAAAAAAGAGCTAGATAATTTACCATTCCAAAACTTTTCTCATGACCATTTTCTTAATCTTCCACTTCTAGAGAGTCCAAAGCTTGTTCAATCTTCTTCAAACATAACCTCTATAGATCATTCAAATCCTATGTTTCCTTCATCAGTGCTCTTAGAAGAAGAACAAATCTTACAAAGTGGTAATCAACAAAACTTTCATGCTATGTATGGAAACAATTCCAATGTTGAACAAGGTATGGTTGATGATGATCAAGTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGATGCATCTAAAGAGAATAATAACAACATCTTTCATGGCAATATTGAATTCAGAAATTTGGAGAAACAAGAAATGGTGCCTCATGAAAATGCCTCTACATCAAACACAAGTTGGATATGA 1041 0.3525 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTTIRKMSEHDSPCWYEDQVSFMQDMDSPNQTSQSNLIYQQLPSYTCKKELDNLPFQNFSHDHFLNLPLLESPKLVQSSSNITSIDHSNPMFPSSVLLEEEQILQSGNQQNFHAMYGNNSNVEQGMVDDDQVTDWRVLDKFVASQLSQDDASKENNNNIFHGNIEFRNLEKQEMVPHENASTSNTSWI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1052 346 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Mtr4g1052 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 335 - -
Mtr4g1052 346 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Mtr4g1052 346 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mtr4g1052 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 335 - -
Mtr4g1052 346 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1052 Mtr-Chr4 13618358 13622997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1052 1 310 NAC Transcription Factor Family AT1G12260 62.500 5.55e-131 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g1052 NAM 4.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1052 - - gmx:100815845 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1052 4 13618358 13622997 Mtr4g1052 4 13618358 13622997 ECH