Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0630 ATGGTTTTTACTTCAATACCAGCAGCTTATCTTGATGCAGCCAACTGGCAGCAACAGCAACAGAACCATCATCAACAACCAGGAAACGGCGGCTCCGTCTCTCAACAACTGCTTCAGACTCAGACACCACCGCCACAACAGTCACAGTCTCAACCTCATGGAGGAGGATCCACTGGCTCAATTAGGCCAGGATCGATGTCCGATAGGGCAAGGATGGCAAACATGCCTATGCCGGAGACAGCACTGAAATGTCCACGTTGTGAATCAACCAACACAAAATTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCCAGACACTTCTGCAAGACTTGCAGAAGGTACTGGACAAGAGGTGGCGCTCTAAGAAATGTCCCAGTCGGTGGAGGCTTCCGGAGAAACAAAAGATCAAGCAAAAGTAGCAACAATGGAAACTCAACAAAGTCTCCGGCAAGCTCTGACCGCCAAACGGGGAGTGCTAGTTCAACAAACTCAATAACCTCCAATAACAATATCCACTCTTCCGCCGATATATTAGGCCTTACACCTCAAATGTCATCATTGAGGTTCATGACACCTTTACATCATAACTTCAGTAACCCTAATGATTTCGTCGGAGGAGGAGATTTAGGGTTAAACTATGGTTTTAGTTACATGGGAGGAGTAGGTGATTTGGGAAGTGCTTTAGGAGGTAATTCAATTTTATCATCAAGTGGTTTGGAGCAATGGAGGATGCCAATGTCAATGACTCATCAACAGCATCAATTTCCTTTTTTGGCTAATTTGGAGGGTACAAATAGTAATTTGTACCCTTTTGAAGGAAATGTTCAAAATCATGAAATGATAACTAGTGGTGGATATGTGAGGCCAAAAGTGATTTCAACTTCTGGAATTATGACTCAACTTGCTTCTGTGAAAATGGAAGATAGTATTAATAGGGGCTTTTTGGGAATTAACACAAGCAACAATAACAGTAATCAAGGAAGTGAACAATTTTGGAATAGTGCTGTTGTTACTGGTAATTCTGCAGCTAATTGGACTGATCATGTTTCTGGTTTTAGTTCTTCTTCTAATACTACTAGTAACCAAATGTAG 1095 0.4219 MVFTSIPAAYLDAANWQQQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMEDSINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSAANWTDHVSGFSSSSNTTSNQM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0630 364 MobiDBLite consensus disorder prediction 123 169 - -
Mtr4g0630 364 ProSiteProfiles Zinc finger Dof-type profile. 82 136 IPR003851 GO:0003677|GO:0006355
Mtr4g0630 364 ProSitePatterns Zinc finger Dof-type signature. 84 120 IPR003851 GO:0003677|GO:0006355
Mtr4g0630 364 MobiDBLite consensus disorder prediction 17 64 - -
Mtr4g0630 364 MobiDBLite consensus disorder prediction 134 169 - -
Mtr4g0630 364 Pfam Dof domain, zinc finger 81 136 IPR003851 GO:0003677|GO:0006355
Mtr4g0630 364 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 12 359 - -
Mtr4g0630 364 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 359 IPR045174 GO:0003700|GO:0006355
Mtr4g0630 364 MobiDBLite consensus disorder prediction 17 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0630 Mtr-Chr4 7957914 7959791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0630 1 313 C2C2-Dof Transcription Factor Family AT5G02460 39.628 2.14e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr4g0630 zf-Dof 4.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0630 - - pvy:116110527 304.293