Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4297 ATGCTTGATACAGTTCTTTTGGCACTTTTTCTTCCTTGTCTAGGAATGAGTGCCATCTTCGTCGTCTACATGTGCCTTCTCTACGCCACCACTCGTCACCGTTCAGATTCAAATCCACCGTTGAAGCCGGTCACCGAAAAGGGTCTCTCCCCTTTAGATCTTGAAAAGCTTCCTAAAATCACCGGTAAGGAATTGCTCGCGCCCACCGAATGCGCCGTTTGCCTTGACGATATCGTTGATGAACAACCGGCTCGTCTGTTACCCGGTTGTAACCACGCTTTTCATCTCCAATGTGCCGACACGTGGCTCTCCAAACACCCTATGTGTCCTCTATGTAGAGCAAAACTTGACCCTCAGAGTCTCAATTCTGAGAGTCCCTGCTGA 384 0.4922 MLDTVLLALFLPCLGMSAIFVVYMCLLYATTRHRSDSNPPLKPVTEKGLSPLDLEKLPKITGKELLAPTECAVCLDDIVDEQPARLLPGCNHAFHLQCADTWLSKHPMCPLCRAKLDPQSLNSESPC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4297 127 SMART ring_2 71 112 IPR001841 -
Mtr3g4297 127 Pfam Ring finger domain 70 113 IPR001841 -
Mtr3g4297 127 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 119 IPR013083 -
Mtr3g4297 127 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Mtr3g4297 127 SUPERFAMILY RING/U-box 70 119 - -
Mtr3g4297 127 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 124 - -
Mtr3g4297 127 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4297 Mtr-Chr3 56883170 56884362 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4297 3 56883170 56884362 Mtr3g4297 3 56883170 56884362 ECH
Mtr1g0751 1 8460318 8460698 Mtr3g4297 3 56883170 56884362 PCT