Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4283 ATGTGTACCTTAATGATTTATTTCTTCATATTATTGGGAGTTGTTTCTTACACAACTAAGGCTAGTTTGGCAACAATAGAGCTTCCACCAAATGTTTCATTTCCAGCAGTATTTGTGTTTGGAGATTCAATCATGGATACGGGCAACAACAATAATAACATGAAAACATATGCTAGGTGCAATTTTCTTCCATATGGTAAAGATTTCAATGGAGGCATCCCTACTGGTCGGTTTTGCAATGGAAAAGTTCCATCAGACTATATAGTTGAAGCATTGGGCATTAAGGAATTTCTGCCGGCGTATTTGGATCCAAATATCCAACCTAGCGATCTCGTCACGGGTGTTTGCTTTGCATCCGGTGGTTCTGGGTATGATCCACTCACATCCAAAAGTGCGTCAGCTATATCGTTGTCCGGTCAAATAATTTTGTTCAAAGAATACATAGGAAAGCTAAAAGGAATTGTTGGAGAGGGTAGAAAAAATTTCATCCTAGCCAACAGTGTTTTCCTTGTGGTTCAAGGAAGTAACGACATTTCCAATACATATTTTTTGAGTCATCTCAGAGAACTACAATATGATGTTCCTTCTTACACTGACCTCATGCTCGCCTCTGCTTCCAATTTCTTAAAGGAAATATATCAACTGGGTGCAAGGAGGATAGGAGTATTAAGCATTCCCCCAATTGGGTGTGTGCCATTTCAGAGAACGGTTGTTGGAGGAATTGAGAGAAAATGTGCAGAAAAAATCAACGACGCATGCAAGTTATTCAACACTAAATTATCAAAGGAGTTGTCTTCTCTTAACCGGAACTTGCCCAATACAAGGATGGTTTACCTTGATGTTTATTATCCTCTTCTTGACATCATTCTAAATTACCAAAATTATGGTTATAAAGTCGTTGACAAAGGATGTTGTGGCACAGGAGCAGTAGAGGTAGCAGTGTTATGCAACCAATTTGCTACCCAATGTGAAGATGTTAGGGACTACGTTTTCTGGGACAGTTTTCATCCCTCAGAGAGTGTTTACAGCAAGCTCTTAAATCCTCTTCTTCGAAAATATATACACCAGTTCTTCTAG 1077 0.39 MCTLMIYFFILLGVVSYTTKASLATIELPPNVSFPAVFVFGDSIMDTGNNNNNMKTYARCNFLPYGKDFNGGIPTGRFCNGKVPSDYIVEALGIKEFLPAYLDPNIQPSDLVTGVCFASGGSGYDPLTSKSASAISLSGQIILFKEYIGKLKGIVGEGRKNFILANSVFLVVQGSNDISNTYFLSHLRELQYDVPSYTDLMLASASNFLKEIYQLGARRIGVLSIPPIGCVPFQRTVVGGIERKCAEKINDACKLFNTKLSKELSSLNRNLPNTRMVYLDVYYPLLDIILNYQNYGYKVVDKGCCGTGAVEVAVLCNQFATQCEDVRDYVFWDSFHPSESVYSKLLNPLLRKYIHQFF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4283 358 CDD SGNH_plant_lipase_like 35 342 IPR035669 -
Mtr3g4283 358 Pfam GDSL-like Lipase/Acylhydrolase 37 347 IPR001087 GO:0016788
Mtr3g4283 358 PANTHER GDSL ESTERASE/LIPASE EXL3 10 356 - -
Mtr3g4283 358 SUPERFAMILY SGNH hydrolase 36 351 - -
Mtr3g4283 358 Gene3D SGNH hydrolase 28 352 IPR036514 -
Mtr3g4283 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 356 - -
Mtr3g4283 358 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 37 48 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4283 Mtr-Chr3 56694827 56700249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4283 3 56694827 56700249 Mtr3g4283 3 56694827 56700249 ECH
Mtr1g0736 1 8352518 8357466 Mtr3g4283 3 56694827 56700249 PCT
Mtr3g4283 3 56694827 56700249 Mtr1g0734 1 8318062 8322440 PCT